Salmo trutta (river trout): 115184546
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Entry
115184546 CDS
T08542
Name
(RefSeq) syndecan-4-like
KO
K16338
syndecan 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecule (CAM) interaction
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115184546
04514 Cell adhesion molecule (CAM) interaction
115184546
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115184546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
stru00535
]
115184546
Proteoglycans [BR:
stru00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
115184546
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
115184546
NCBI-ProteinID:
XP_029601258
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MPHLFLRLTIHFVEETVNRNMHKVYLVFFLFASVYSESVWKTETWMPMKTTQAVFHDELI
SSGDSANGSDFGFPDEEHDTFDNEDKTDDNKDYDDFSGSGDGGPTITIKNDKPSMNNKIP
DLRLKPTVNEIQLVQKNNEVLVPVSPKPEEHPSNVLMAHAGEESIFNKTEVLAALIAGGA
VGLFFAVLLILLLVYRMKKKDEGSYDLGKKPIFKKAPTTEV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgccacacttgtttctccggttaacgatacactttgttgaagaaacggtcaatagaaac
atgcacaaagtgtacctcgttttttttttatttgcttccgtctactctgagtcggtgtgg
aagactgagacatggatgcccatgaagacgactcaagctgtgtttcatgacgagctcatc
tcgtctggagactccgccaacggctcagactttggcttccccgatgaggagcacgacacg
tttgacaacgaggacaagaccgacgacaacaaggattatgacgatttctctggctctggc
gacggaggaccaactattacaatcaaaaacgacaagccttctatgaacaacaagattcca
gacctgaggctcaaacccacagtgaacgagattcaattggtccagaagaacaatgaagtg
ttagtgccggtttctcccaagcctgaggagcacccatcgaatgtactgatggcccatgca
ggggaggagagcatcttcaacaagactgaagtcctagcagctcttattgctggtggagca
gtggggctgttctttgctgtcctcctcatcctcctgcttgtctaccgcatgaagaagaag
gatgaaggcagctacgacctgggaaagaagcccatcttcaagaaggctcccaccacagag
gtctaa
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integrated database retrieval system