Salmo trutta (river trout): 115196104
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Entry
115196104 CDS
T08542
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115196104
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115196104
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
SieB
FixH
Motif
Other DBs
NCBI-GeneID:
115196104
NCBI-ProteinID:
XP_029612528
Ensembl:
ENSSTUG00000037399
LinkDB
All DBs
Position
6:49198299..49244048
Genome browser
AA seq
2028 aa
AA seq
DB search
MAQLLVPPGPDSFCRFCPDSLAAIERRIAEEEARKPRVDRCSDSNDDNEPKPNSDLEAGK
SLPFIYGDVPQGFVSTPLEDLDPFYSIQKTFIVLNHGKAIFRFNATPACYILSPFSPLRR
IAIAVLVHSMFSMLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRNLVNDTTPDDRLNRTLGTAN
LNGTDFNITSSVNWTEYINDESNYYYLPNRRDALLCGNGSGAGLCPEGFTCIKAGRNPDY
DYTSFDSFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILA
VVAMAYDEQNQATIEEAAQKEEEFQAMLEQLKRQQEEALVAAAAATESHGEYSGRGGPSS
EASSGTSKLISKSAKERMNRQKKRKERGEHKKFHKSESEDSIKRLSFRFSIDANRLSYEK
RCSSPNQSLLSIRGSLFSPRRNSRASLFSFQGRARDVVSDNDFADDEQSTFEDTDSRRGS
LFVPCRIERRSSTVSQTSLAPQRVLLPANGKMHSTVDCNGVVSLVGGTSVPTSPVGLLLP
EGTTTDSEMRLKKRRSRQASMAYLDEPDRARARAMSVASILTNTMEELEESRQKCPPCWY
KFANTCLIWDCCPMWLSFKGIVNTVVMDPFVDLAITVCIVLNTLFMAMEHYPMTKEFNHV
LSVGNLVFTGIFTAEMCFKLIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEGLSVLR
SFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKEC
VCKIADNCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVMVIG
NLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGVAWVKVTIRQVIQSLFL
GGGATKRVKGGSLEGDKTLDELHSSINGKGGNCISKHMLVEITKDPSGVCLKEGNGRPRG
GLGVGLGDSTANYPKEECNYMSFIHNPSLTVSVPIAVCESDFETAITEDFSSDSASEEMS
MGSKESRSKFLKLPIEPQHLTSSEGSSVDIGPPGDGAESVELEDEESEDPENCFTDGCVL
RFQCCQVNVEEGKWKMWWTLRKTCFIIVEHNWFETLIIFMILLSSGALAFEDIYIEQRKT
IKIVLEYADKVFTYIFILEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANALGYS
ELSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVN
LFAGKYYYCVNTTNDETFPIEVVNNKSDCLALANNSARWKNVKINFDNVGAGYLALLQVA
TFKGWMDIMYAAVDSRNVELQPQYEQNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQ
KKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDFVTKQAFDIVIMI
LICLNMVTMMVEEDDQTPERENILHWINFVFIVLFTGECTLKMISLRHYYFTIGWNVFDF
VVVILSIVGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPA
LFNIGLLLFLVMFIYAIFGMSNFAYVKHEAGIDDMFNFETFGNSMLCLFQITTSAGWDGL
LAPILNKKEPDCDSQMEHPGTLYRGNCGNPPVAMFFFVSYIIICFLIVVNMYIAVILENF
SVATEESAEPLSEDDFEMFYEVWERFDPDATQFVEYDKLSDFADALDPPLRMAKPNHIQL
IKMDLPMVSGERIHCLDILFAFTKRVLGEGEGLDLLRGQMEERFMASNPSKVSYEPITST
LRRKQEDMSAVVIQRSFRRYLARLALKKAAELCKEQPKGSVMYELEDKEVLVIGQLADNS
TSTEKTDMTPSTASLPSYNSATNLEKDQYEKEKREKENRDKDLREQNK
NT seq
6087 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccgcttctgtcccgactcg
cttgccgccatcgaaaggcgcatcgccgaggaggaggcccggaaaccccgcgttgaccgc
tgtagcgacagcaatgacgacaacgagcccaagcccaacagcgacctggaggcggggaag
tccctccccttcatctacggggacgtcccccaaggctttgtctccacccctctggaggac
ctggaccccttctattccattcagaagacatttatagtgttgaatcacggcaaggcaata
ttccgtttcaacgccactcctgcctgttacatcctaagccccttcagtcctctacggaga
atagcaattgcagttttagtacactcgatgttcagcatgttgatcatgttcaccattctg
accaactgtgcttttatgactctgagcaaccccccggactgggccaagaatgttgagtac
acattcacaggaatttatacattcgagtctctcattaaaatcttggcgagggggttctgt
gtggggaagttcaccttcctcagggatccatggaactggttggacttcatggtaatctcc
atggcatatgtgacagagtttgtggacctgggtaatgtctcggccctcagaaccttcagg
gttctccgagccctcaaaactatatcagtcatcccaggactaaagaccatcgtgggcgct
ctgatccagtcggtcaagaagctctccgacgtcatgatcctcaccgttttctgtctcagc
gtcttcgccctgattggcctgcagctcttcatgggcaacctgagacagaagtgtatccgc
aacctcgtcaatgacacgacccccgacgaccgcctgaacagaactctgggaactgcaaac
ttaaatggaaccgatttcaacatcactagctccgtaaactggactgagtacatcaacgat
gagagtaattactattacctccccaaccgtagggacgccctcctctgtgggaatggcagt
ggagccgggttgtgcccagagggattcacgtgcatcaaggcgggcaggaacccagactac
gactacacaagcttcgactcgtttggctgggccttcctgtccctgttcagactcatgacc
caggacttctgggaaaatctctaccaacagaccctgcgagcggcggggaagccctacatg
atcttctttgtgttggtgatcttcctgggttccttctacctggtcaacctgatcctggct
gtggtggccatggcctacgatgagcagaaccaggccaccatagaggaggcagcccagaag
gaggaggagttccaggccatgctggagcagctcaagagacagcaggaggaggcattggtt
gccgcggcagcagccacagagagccacggagagtacagcgggagaggggggccctcctca
gaagcctcctcagggacctccaaactcatctccaagagcgccaaggagagaatgaaccgt
cagaagaagagaaaagagaggggcgagcacaagaagttccacaagtccgagtcggaggac
agtatcaagaggttaagcttccggttttcgatagatgccaaccggctgtcctacgagaag
agatgctcctcacccaaccagtctctcctcagtatccgtggctccctcttctccccgagg
aggaacagccgagctagcctgtttagcttccaaggccgcgcccgcgatgtggtctccgat
aacgacttcgcagacgacgagcaaagtacgttcgaggacaccgacagccgccgcggctcc
ctgttcgtgccttgccgtatcgagcgccgctccagcacggtcagtcagactagcctggcc
cctcagcgcgtcctgctgcccgccaacggcaagatgcacagcaccgtggactgtaacggc
gtcgtctcgctagtgggagggacctcggtgcccacctcgcctgtaggactgctcctgcct
gaggggacaaccactgactctgagatgaggctgaagaagaggaggtctcgccaggcgtcc
atggcctacctagatgagccagacagagccagagccagagctatgagtgtggccagtatt
ctcaccaacaccatggaggagcttgaagagtccaggcagaagtgtccaccatgctggtat
aagtttgccaacacctgtctgatctgggactgctgtcctatgtggttgagtttcaagggg
atcgtcaacacagtggtgatggaccccttcgtggacctggccatcaccgtctgtatcgtt
ctcaacaccctcttcatggccatggaacattatcccatgaccaaggagttcaatcatgtc
ctctctgtcgggaacctggtgttcacaggcatcttcacggccgagatgtgtttcaagcta
atcgctctggacccctactactactttcaacagggatggaacatatttgacggcatcatc
gtcagtctgagtctgatggagctcggcctggccaatgtagagggcctgtctgtgctccgg
tctttccgattgttgagggtgttcaaactggccaagtcttggcccaccctgaacatgctg
atcaagatcatcggtaactcggtgggagctctgggtaatttgacactggtcctagccatc
atcgtgttcatcttcgccgtggtgggcatgcagctgtttggcaagagctacaaggagtgt
gtgtgtaagatcgcagacaactgccagctgccgcgctggcacatgcatgacttcttccac
tcgttcctcatcgtgttccgggtgctgtgtggggagtggatcgagaccatgtgggactgt
atggaggtggctggccagagcatgtgcctcatcgtctttatgatggtcatggttataggg
aacctggtggtcctgaatctgttcctggccctgctgctcagctccttcagcgccgacaac
ctggcggccacggacgacgacagcgagatgaacaacctgcagatcgctgtgggccgcatc
cagaggggcgtggcgtgggtcaaggtgaccatccgtcaggttatccagagcctgttcctc
gggggcggagccaccaaacgggtcaagggggggtcactggagggggataagaccctggac
gagctccacagctccatcaacggcaaggggggcaactgcatctcaaaacacatgttggtc
gagatcactaaagatccgagtggggtctgtctgaaggaggggaacgggcggcccagaggg
gggttgggggtggggttaggagacagtacggcgaattacccaaaggaggagtgcaactac
atgtcgttcatccacaaccccagcctgacggtgagcgtgcccatcgcggtgtgcgagtcg
gactttgagaccgctatcacggaggacttcagcagcgactcggcctctgaggaaatgtcg
atgggcagcaaagagtccagatcaaagtttttgaagctacctatagagccccagcacctt
acctcgtcggagggcagctcggtggatatcggtcccccgggggatggagctgagtcagtg
gagttggaggacgaggagtcagaggacccagagaactgcttcactgatggctgtgtgctc
aggttccagtgttgccaggtgaacgttgaggagggcaagtggaagatgtggtggaccttg
aggaagacgtgcttcatcatcgtggaacacaactggttcgagaccttaatcattttcatg
atcctgctcagcagtggcgctctggcgtttgaagacatttacatagagcagcggaagacc
attaagatagtgctggagtatgcagacaaagtcttcacctatatcttcatcctggagatg
ctgctgaagtgggtggcctatggattcaagaagtacttcaccaacgcctggtgttggctg
gacttcctcattgttgatgtgtctctggtgagcttggtagccaatgcgttaggctactct
gagctgagtgccattaaatccctacgaaccctgcgggccttaagacccctgagggccttg
tcacggttcgagggcatgagggtggtggtgaacgccctcctgggtgccattccgtccatc
atgaacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggcgtcaat
ctgttcgcagggaagtactattactgcgtcaacaccaccaacgacgagacctttcccatc
gaggtggtcaacaacaagagcgactgtctggccctggccaataacagcgcccgatggaag
aatgtcaagatcaactttgataatgtcggggccgggtatttggccttgttgcaagtggca
acatttaaaggttggatggacatcatgtacgcagctgtggactctcgtaatgtggaactt
cagccccaatatgaacagaacctctacatgtatctgtactttgtcatcttcatcatcttt
ggctccttcttcactctcaacctcttcattggtgtcatcattgacaacttcaaccaacag
aagaaaaagtttggaggtcaggacatcttcatgacagaggaacagaagaaatactacaat
gccatgaagaagctcggctccaagaaaccccagaagcctattcccaggccaacgaatgca
ttccaaggctgtgtgtttgacttcgtaacgaagcaggcttttgacattgtcatcatgatc
ctcatctgcctcaacatggtcactatgatggtggaagaggatgaccagacaccagagagg
gaaaatatcctccactggattaactttgtctttatagtgctcttcactggggagtgtacg
ctcaaaatgatatccctccgccattactacttcaccattggctggaacgtgtttgacttt
gtcgttgtcatcctttcaatcgtaggtatgtttttatcagaattgattgagaagtacttt
gtttccccaacgttattccgagtcatccgacttgccagaatcggccggatcctccgtctc
atcaagggcgctaagggcatccggacgcttttgttcgccttgatgatgtcacttcctgcc
ctgtttaacattggcctcctgctcttcctcgtcatgttcatctacgccatcttcggcatg
tccaacttcgcctacgtcaagcacgaggcgggaattgacgacatgttcaacttcgagacg
ttcggcaacagcatgctctgcctgttccagatcaccacgtcggcgggctgggatggcctc
ctggcgcccatcctcaacaagaaggagcctgactgtgacagccagatggagcatccgggc
accttgtaccggggaaactgcggcaacccgccagtggccatgttcttcttcgtcagctac
atcatcatctgtttcctcatcgtggtcaacatgtacatcgccgtcatcctggagaacttc
agcgtggccaccgaggagtcggccgagccgctgagcgaggacgactttgagatgttctac
gaggtgtgggagcgcttcgacccggacgccacgcagttcgtggagtacgacaagctgtcg
gactttgcagacgcgttggacccaccgctgcgaatggccaagcccaaccacatccagctg
atcaaaatggatctgcccatggtcagtggggagcgcatccactgccttgacatcctgttt
gccttcaccaagcgtgtcctgggagagggtgaaggcttggacctcctccggggccagatg
gaggagcgcttcatggcctccaacccctccaaagtctcctacgaacccatcaccagtacc
ctgcggcgcaagcaggaagacatgtctgccgtggtgatccagaggtcattcaggcgctac
ctggcccgactcgctctgaagaaagcagcagagctctgcaaggagcagcctaaaggcagt
gtgatgtacgagctggaggacaaggaggtgctggtgataggacagttagcggacaactcc
acctccacagagaaaacggacatgacgccctccaccgcctcgttgccttcgtacaacagt
gccacaaatttggagaaagaccaatatgagaaagaaaagagggagaaagagaacagagac
aaagatctgagagagcaaaataaataa
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