Salmo trutta (river trout): 115202237
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Entry
115202237 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 827-like
KO
K27104
zinc finger protein 827
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115202237
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115202237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_16
zf-H2C2_5
zf-C2H2_4
zf-C2H2_5
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
115202237
NCBI-ProteinID:
XP_029622085
LinkDB
All DBs
Position
11:13192794..13304262
Genome browser
AA seq
1535 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDSVEEGGPDGGCCPVEDDGGGVGGGGWYGNASDTRSESSYSGDI
HDDHELFLHGGSSPTPSPDRPPEHPDTSTESSLGGCPTPVHSHHHHHHRASLELLSLGVD
GGVFSAQDTLSSVVSSLYGEAASEALGKPLSSNLRRLLEAGSLKLDGELLGRMRGRGGES
PPIGLAPALTLSPSSHHAQQLSALARKLAANNNNNNSGGSASASPASVAIVDHRHQAGAL
RPLRLGGRPRATALASCGWEWPATGSGPRRVAPPPAASSLSPDSAIQKLKAAANAVLQDK
NATVVASSTSSSSSSCSTVPTLGGGSRGGTDDSVRFDAFTSPFSPQSASSTLAALSKKVS
ERSQITSTSSSSDHQPSPGSSFLSLVSMTSSAALLKEVAARATGNLLADKWRPSAGAGAI
QEDIRPLLDRNQKAGTPTGPQSTMDLLLPSTPKGRAKPSSQAGSPGEDGGKPFQCPVCGL
VIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCELCPFT
SSRHFSLKLHMRCHQHFPRSGSASDGVKVKEEATTDTEGEGSLMGDYNPGESPLQSDAGN
QSSPGVSNHHVYIKEEPQERELSVLSPFTLCRDRERERPGSSGNSLDLSMGGVGVGVRSS
PGGGPTAASLFSPDITTKTATDLLMKLSAANQKEALKSPQSFHLKQEPRAEEEEEELRRS
PRSQPSYSSFYQEQGAALGATGPAEVTADSGGHRGTLKGREGSPMGNKNSLLSQDINFKV
ASELLMKLSESNKDAAHYQKVTVKAEPMEVDPASGPAPPPSHLLAFSTLGPCEKSEAMAS
LPEALSRPQKQDLFSQDISVKMASELLFQLSEKVSKANDHKDSNMVGISSPFLDERFRQS
PFSQRSKSSSPAEASSSARTALHDPEKDTGESGGNGMSQGILSSQQLHPCPVCGKVFGRQ
QTLSRHLSLHTEERKYTCHLCPYAAKCRANLNQHLTIHSVKLVSTDAEQMVSAVTTAEGR
DGKTFPYYYSCHACGFQTGLNAQFVSHMSLHVDKEQWMFSLCCSACDYVCVEESDMKSHV
SHGHTGLNSRSPLSETKSTSSSLSALSDSLNSSEGGELTHANEELKNLLAPPSSAGSQSS
SSSHSGSGTEEKSEKGFECVFCNFVCKTRTMYERHLQIHLITRMFECDVCHKFLKTPEQL
LEHKKCHTVPTGGLKCPVCIYSTNRPAAMECHLKTHYKMEYKCRICQSVWRDQPALERHV
REHRLGNHYKCEQCGYLSKTANKLIEHVRVHTGERPFHCDRCGYSCKRKDNLNLHKKLKH
APRQTFGCTECPFTTTHPFIFSRHLKKHQGGGEGEEAGEEEFQAQLGGSLVGSLRGGEPF
LLGVGGGGDGSSGGSGSSSPLMILSASQALQSVALSLITGKQHHRQQELPPPAQRYLTAT
TTNGGGPSLFFPSPRHVYEQLGNCERAHLIPLTTLFTHRHRSTFHSPLSRLQRPPSSSPL
FLSSTASSPSSSPTSLKHSFLAYLGLGLTERAKTV
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacccaaacgcctgccttcacatgtggacagcgtcgag
gagggtgggcccgacgggggctgctgtcccgtcgaggacgacggcggcggcgttggcggc
ggtggctggtacgggaacgcctccgacacgcgctccgagtcgtcgtacagcggcgacatc
catgacgaccatgagctgttcctccacgggggctcctctcccaccccctccccagaccga
cctccggaacaccccgacacctcgactgagagctccctggggggctgccctacgcctgtc
cacagccaccaccaccaccaccaccgagcctcccttgagctcctgagcctgggggtggac
ggaggggtgttctctgcccaggataccctttcctccgtggtatcctcgctctatggagag
gctgcctccgaggccctggggaaacccctgagtagtaacctgcggcgcctcctagaggct
gggtcattgaagctggatggggaacttctgggtagaatgagaggaaggggaggagagtcg
ccccctataggcttagctccagccctgaccctctccccctcctcccatcatgctcagcag
ctaagtgccctcgcccgaaaactggcggccaataacaacaacaacaacagtggaggctct
gcctcggcctcgcccgcctctgttgccattgtcgaccaccgccatcaagcaggagccctg
cgaccccttcgcctcggtggtcgcccccgagcaacggcgctggcttcgtgtgggtgggag
tggccggcgacgggaagtggcccccggcgggttgctccgcctccagcggcgtccagccta
tcaccggactcggccatccagaagctgaaagcggcagccaacgcggttttacaggacaag
aatgccaccgtagtggcctcgtctacttcctcttcatcatcctcctgctctacagtaccc
accctgggaggagggagccggggaggaacggacgactcggtacgcttcgatgccttcacc
tcccccttcagccctcagtcggccagctccacgctagcagccctgtccaagaaggtgagc
gagcgctcccagatcacctccacctcctcatcatcagaccaccaaccctcccccggctcc
tccttcctctccctggtctctatgacttcctcggctgcgctcctcaaggaggtggcagcc
cgggcgacagggaacctccttgctgataaatggaggccctcagcaggagcaggggccatc
caggaggacatcaggcccctgctggacaggaaccagaaggcagggacccccacagggccc
cagagcaccatggacctgctgctgccctccacccctaagggaagggccaaacccagcagc
caagcaggttccccgggggaggacggagggaagccgttccagtgtccggtgtgtggcctg
gtcatcaagaggaagagctactggaagagacacatggtgatccacaccggcctgaagagt
caccagtgtcccctgtgccccttccgctgcgcccgcaaagacaatctcaagtcccacatg
aaggtccaccagcatcaggaccggggcgagacgttccagtgcgaactttgccctttcacc
tcctcgcgccacttcagcctcaagctccacatgcgctgccaccagcacttcccccgctcc
gggtccgcctccgacggggtcaaggtcaaggaagaggccaccacggacacagagggcgag
gggtcactcatgggcgattacaaccccggggagtcccctctccagtcggacgcagggaac
cagagctcccctggagtctccaaccaccacgtctatataaaagaagagccccaggagagg
gagctgtcagtgctgtcacccttcaccctctgcagggacagggagcgggagcgacctggt
agcagtggcaactccctggacctctctatggggggagtcggggtgggggtgcgatccagt
cctggtggaggtccaacggcggcgtccctcttcagcccggacatcaccaccaagacagcc
accgacctgctcatgaagctctcagcagccaaccagaaggaagccctgaagtctccacag
tccttccatctgaaacaggaaccccgggcagaggaagaggaggaagagttgcggaggagc
ccccggagccagcccagctactcctccttctaccaggagcagggcgcggcgctgggggcc
acagggccagcagaggtcacagcagacagtgggggccacagagggaccctgaagggacgg
gagggaagccccatggggaacaagaacagtctcctcagccaggacatcaacttcaaggtg
gcgtcggagctgctgatgaagctatcagaaagcaacaaggacgccgcccactaccagaag
gtgacggtgaaggcggagcctatggaggtggacccggccagcggcccggccccgccccct
tctcacctgctggccttcagcactttagggccgtgtgagaagagcgaggcaatggccagc
ctccctgaggcgttgtcccgcccccagaagcaagacctcttctcccaggacatatcggtg
aaaatggcctccgagctcctcttccaactctcagagaaagtcagcaaagccaacgaccac
aaagacagcaacatggtgggcataagcagccccttcctggacgagcgtttcagacaatcc
cctttcagccagcgctccaagtcctcctcccctgcagaggccagctcctctgctaggaca
gccctccacgaccctgagaaggacactggagagtcgggggggaacgggatgtcccagggg
atactgagcagtcagcagctccacccctgtcctgtctgtggcaaggtgtttggcagacag
cagaccctctccagacacctatctctacacacagaggagcggaagtatacgtgtcacctg
tgtccttatgcagccaagtgcagagccaacctcaaccagcacctgaccatccactctgtc
aagctggtcagcaccgacgcagagcagatggtcagcgccgtcaccaccgctgagggacga
gacgggaagaccttcccctattactacagctgccatgcgtgtggtttccagacggggctg
aacgcccagttcgtcagccacatgtctctccacgtggacaaggagcagtggatgttctct
ctgtgctgcagcgcctgtgactacgtctgtgtggaggagagtgacatgaagtcccacgtc
agtcacggacacacaggtctgaactcgcggagccccctcagtgagactaagagcacctcc
tcctccctgtcggccctcagcgattcgctaaacagctcagagggtggagaacttacccat
gccaatgaggagctcaagaacctgctggcccctccctcctctgcaggcagccaatccagc
tccagcagccactcgggatcaggaactgaagagaagtctgagaaaggctttgagtgcgtc
ttctgcaactttgtgtgcaagacgcggaccatgtacgagcgccacctccagatccacctg
atcacgcgcatgttcgagtgcgacgtgtgccacaagttcctgaagacgcccgagcagctg
ctggagcacaagaagtgccacaccgtccccaccggagggctcaagtgccccgtctgcatt
tattccaccaatcgaccggcagccatggagtgccacctgaagacccattacaagatggag
tacaagtgtcgcatctgccagtcggtgtggcgcgaccagcccgcgctggagaggcacgtc
cgcgagcatcgcctcggcaaccactacaagtgcgagcagtgcggctacctgtccaagacg
gccaacaagctgatcgagcacgtgcgcgtgcacacgggcgagcggcccttccactgcgac
cgctgcggctacagctgcaagcgcaaggacaacctgaacctgcacaagaagctgaagcac
gccccgcgccagaccttcggctgcacggagtgccccttcaccaccacccaccccttcatc
ttcagccgccacctcaagaagcaccagggtggaggggaaggggaggaggccggcgaggag
gagttccaggcccagctaggaggctctctggtggggtctctgcggggcggggagcccttc
ctcctgggggtaggtggaggtggggatgggagtagcggggggagcggcagcagcagcccc
ctcatgattctctctgcctcccaggccctgcagtctgtcgccctgtcactcatcacaggg
aaacaacaccaccgtcaacaggaactcccgcccccagcccagcgttacctgacagcgacc
acaaccaatggcggaggcccctccctcttcttcccctccccacgccacgtctacgagcag
ttgggaaactgcgagcgggcgcacctgatccccctcacaaccctgttcacccaccgccac
cgctccacattccactcgcccctctccagactccagaggccgccctcctcctcccccctt
ttcctctcctccaccgcctcctccccctcttcctcgcccacctcactcaaacactccttc
ctggcttacctaggactaggactaacggagagagccaagactgtgtga
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