Salmo trutta (river trout): 115206520
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Entry
115206520 CDS
T08542
Name
(RefSeq) WD repeat and FYVE domain-containing protein 1
KO
K23299
WD repeat and FYVE domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115206520
Membrane trafficking [BR:
stru04131
]
Autophagy
Other autophagy associated proteins
Others
115206520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
FYVE
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
FYVE_2
Motif
Other DBs
NCBI-GeneID:
115206520
NCBI-ProteinID:
XP_029629468
Ensembl:
ENSSTUG00000004442
LinkDB
All DBs
Position
13:74400820..74422309
Genome browser
AA seq
410 aa
AA seq
DB search
MAAEIHSRPQSSRPVLLNKIEGHSDAVNAAVLIPKEDGVITVSEDRTIRVWLKRDSGQYW
PSIYHTVSSPCSCMSYHHDSRRIFIGQDNGAIVEFLLSEDFNKMNHVKTYPAHQNRVSDM
VFSLESEWVVSTGHDKSVSWMCTQSGSMLGRHYFGSWASCLQYDNDTQHAFVGDYSGQIT
LLKLERQTYSTITTLKGHEGSIGALWWDPVQRLLFSGASDHSVIMWDIGGRKGRTLLLQG
HHERVQAVRYLQLTRQLVSCSADGGVTVWNMDTPREEAPQWLDSDSCQKCEQPFFWNVKQ
MWDSKTIGLRQHHCRKCGKAVCGKCSSKSTTYPVMGFEFQVRVCDTCYDTVKDEDRTALA
TFHEGKHNIAFMDMDPSRGLMVTCGSDRVVKIWDMTQVVGCSIATGFSPR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagattcattcgaggcctcaaagctcaagaccagttcttctaaataaaatc
gaaggacactcggacgcggtcaatgctgcagttttgataccaaaagaggacggagtgatc
acggttagcgaggacagaactatccgggtatggctgaagagagacagtggacagtactgg
cccagcatctaccacacagtctcctcgccgtgctcctgtatgtcataccatcacgacagc
aggcgcatcttcatcgggcaggacaacggagccattgtggaattccttctgtctgaagat
ttcaacaagatgaaccatgtgaagacctatcctgcccatcagaaccgtgtgtcagacatg
gtgttttctctggagagcgagtgggtggtgagcaccggacacgacaagagtgtgagctgg
atgtgcacccagagcggcagtatgctggggcgccactacttcggctcctgggcctcctgt
ctacagtatgacaacgacacccagcatgcctttgtaggggactactcaggacagatcacc
ctgctgaaactggagagacagacctactccaccatcaccacactgaagggccacgaaggt
agtattggagctctgtggtgggatcctgttcagaggcttttgttctcaggagcgtctgac
cacagtgtcatcatgtgggatatcgggggccgcaagggacgaacactactgctccaggga
caccatgaacgagtgcaggcggtgcgatacctgcagctgaccagacagctggtgtcctgt
tctgcagatggcggcgtcacagtgtggaacatggacactcccagagaagaggctcctcag
tggttggacagtgactcgtgtcagaagtgtgagcagccttttttctggaacgtcaaacag
atgtgggactccaagaccattggacttaggcagcaccactgcaggaagtgtggcaaagcg
gtgtgtgggaagtgtagttccaagagcactacataccctgtgatgggctttgagttccag
gtgcgagtgtgtgacacctgctacgacaccgtcaaggacgaggatcgtactgcgttagca
acgttccacgaggggaagcacaacatagcctttatggacatggacccttccagaggcctg
atggtgacctgtggcagcgaccgtgtcgtcaagatatgggacatgacgcaagtggttggc
tgtagcatagcaacaggcttctccccacgttga
DBGET
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