Salmo trutta (river trout): 115207809
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Entry
115207809 CDS
T08542
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115207809
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115207809
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115207809
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115207809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
115207809
NCBI-ProteinID:
XP_029631163
Ensembl:
ENSSTUG00000014269
LinkDB
All DBs
Position
14:complement(31434164..31441436)
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AA seq
486 aa
AA seq
DB search
MAVTPRRVRLKPWLVAQVDSGLYPGLVWIDRDNKRFRVPWKHATRHTPQHEEENTIFKAW
AVETGKFQEGIDDPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCDIPQPL
SNPGSSDSGSWTPNDCDEDEPDTPEPLPPYPTSNGTSPTLMWSPPGSVSPLHPPSCPPSV
EVWPKEEVKPWPKEEPLDVEMQPSHEEMAPPPPLDMPSLPMSDMMFASPEMWISSLPMTD
LEVQFQYRGKEVCPAMTVSNPQGCRLFYGDLGPMVNQEELFGPISLEQLRFPSTEHIAND
KQRVFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNAPNLIERQRKVKL
FCLESFLSGVIAHQRGQSAILPQFDINLCFGEEWPDSRPRERKLIMVQIIPVVARMITEM
FSGDCMRSFDSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQEGWPQALPPGAGMSLP
QALHAQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaccccgcggcgtgttcggctcaagccctggctagtggcccaggtggacagt
gggctctacccaggtctggtgtggatcgatcgggacaacaagcgcttcagggtcccctgg
aaacacgctacgcgccacaccccccagcatgaggaagagaacaccatctttaaggcctgg
gcagtggagacaggaaagttccaggagggtattgatgaccctgaccctgccaagtggaaa
gcccagctccgctgtgccctcaacaagagcagagagttcaaccttgtctacgatggcacc
aaagaagtccccatgaaccccctgaagatctacgatgtctgtgacatcccacagcccctc
agtaacccaggatcctcagactctgggtcctggacgccgaatgactgtgatgaagatgaa
ccagatactccagagccccttcctccttatccaacatccaacggcaccagccccactcta
atgtggtctcctccggggtcagtatcgcccctccacccccccagctgccccccatcagtt
gaagtgtggcccaaagaggaggttaagccgtggccaaaagaggagcctttggatgtggag
atgcagccctcccatgaggagatggcgccccctcctccacttgacatgccttcccttccc
atgtctgacatgatgtttgcctccccagagatgtggatcagctccttgcccatgacagac
ctggaggtgcagttccagtatcggggtaaggaggtgtgtccagccatgactgttagtaat
ccccagggctgcaggctgttttacggggacctgggccccatggtcaaccaggaggagttg
tttggccctatcagcctggagcagctgaggttcccctctaccgagcacatcgccaacgac
aagcagagggtcttcaccaaccgcctgctggatgtcatggaccgaggcctcatcctggag
gtcagcggccatgacatctatgccgtccgcctctgccagtgcaaggtgtactggtcaggc
ccctgtgcacccaaccccaatgcacccaacctcatagagaggcagaggaaggttaagttg
ttctgtctggagtcgtttctcagtggtgtaatagcccatcagaggggccagtcggccatt
cttcctcagttcgacatcaacctgtgctttggagaggagtggcctgacagcagacccagg
gagaggaagctcatcatggtgcagatcatccctgtggtagcacgtatgatcactgagatg
ttctcaggtgactgcatgcgctccttcgacagcggcagcgtgcgcctgcagatctccatc
ccggacatcaaggacaacatcgttacccacctgaagcagctgtaccgcctgctgcagacc
caccagggccaggaaggatggcctcaggctctgccccctggggctggcatgagcctgccc
caggccctgcacgcccagtga
DBGET
integrated database retrieval system
