Streptomyces sp. VN1: EZV63_07565
Help
Entry
EZV63_07565 CDS
T10674
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
strv Streptomyces sp. VN1
Pathway
strv00040
Pentose and glucuronate interconversions
strv01100
Metabolic pathways
strv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EZV63_07565
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EZV63_07565
Enzymes [BR:
strv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EZV63_07565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
QIP69767
LinkDB
All DBs
Position
complement(1700619..1701974)
Genome browser
AA seq
451 aa
AA seq
DB search
MSTHIWHEHDKSSRAGQATWTAALAGCTALVLSLAAAPAEARTGHHHPRDTARQTLPAND
GWASHGTGTTGGAAAAAERVFTVSTWAGFRAALAVEGTAPRIIKVKGTVDAVSAGCEAFA
APGYDFDAYLEAYSPENWGMDTDLSAEPDDSPEGLRRASAAEQDTSIKAHVPANTTIVGV
GRNAGLKGASLQIKDVDNVIVRNLTFESPVDCFPQWDPTDGDQGNWNSEYDSAVVYGATH
VWLDHNTFTDGEHPDSAAPTYFGMLYQQHDGQLDIVKGADHVTASWNVFTEHDKTILIGN
SDSEATAAVDRGHLKSTFHHNLFKGLVERAPRVRFGQVDVYNNHFVAGDDYGYSFGVGKE
SQLVAEHNAFTLPDGVSAGQVLKRWNDSPLTAAHNRVNGRTTDLIAAHNAQNPDVPLGSG
AGWTPTLRTEVLPSRAVPSVVDRGAGAGRLR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcatatatggcatgagcacgacaagagcagccgtgccgggcaggcgacctgg
accgccgcgctcgccggctgcaccgcgctcgtgctgagcctggcggccgccccggccgag
gcccgcaccggccaccaccacccccgggacaccgcccgccagacactgcccgcgaacgac
ggctgggcctcccacgggaccggtaccaccggcggggccgccgccgctgcggagcgcgtg
ttcaccgtctccacctgggccgggttcagagccgccctcgccgtcgagggcaccgcgccg
cggatcatcaaggtgaagggcaccgtcgacgccgtctccgcgggctgcgaggccttcgcc
gcgcccggctacgacttcgacgcctacctggaggcgtactcccccgagaactggggcatg
gacaccgacctgagcgccgagcccgacgacagccccgagggactgcgccgcgcctccgcc
gccgagcaggacacgtccatcaaggcgcacgtccccgccaacaccacgatcgtcggcgtc
ggacggaacgccggactcaagggcgccagcctgcagatcaaggacgtggacaacgtcatc
gtccgcaacctgaccttcgagagccccgtcgactgcttcccgcagtgggaccccaccgac
ggcgaccagggaaactggaactccgagtacgacagcgccgtcgtgtacggggcgacgcac
gtgtggctggaccacaacaccttcaccgacggcgagcaccccgacagcgcggcgcccacc
tacttcgggatgctctaccagcagcacgacggccagctggacatcgtgaagggcgccgac
cacgtcaccgcctcctggaacgtgttcaccgagcacgacaagacgatcctgatcggcaac
agcgacagcgaggccaccgcggcggtcgaccgggggcacctgaagtcgaccttccaccac
aacctgttcaaggggctcgtcgagcgcgcgccccgcgtccgcttcggccaggtcgacgtc
tacaacaaccacttcgtggccggtgacgactacggctacagcttcggcgtcggcaaggag
tcccaactcgtcgccgagcacaacgccttcaccctgccggacggcgtcagcgccgggcag
gtcctcaagcggtggaacgactcgccgctcaccgccgcccacaaccgcgtcaacggccgc
accaccgacctgatcgccgcgcacaacgcccagaacccggacgtgccgctcgggtccggc
gcgggctggacacccacgctgcgcaccgaggtcctgccgtcccgggcggtcccgtccgtc
gtcgaccgcggggcgggcgccggccgtctgcgctga
DBGET
integrated database retrieval system
