Streptomyces sp. VN1: EZV63_12415
Help
Entry
EZV63_12415 CDS
T10674
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
strv Streptomyces sp. VN1
Pathway
strv00040
Pentose and glucuronate interconversions
strv01100
Metabolic pathways
strv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EZV63_12415
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EZV63_12415
Enzymes [BR:
strv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EZV63_12415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QIP70594
LinkDB
All DBs
Position
complement(2807106..2808641)
Genome browser
AA seq
511 aa
AA seq
DB search
MRRPVALRLQAALGTLALAAATGVVLSMPEAAAAAGGATGYATQNGGTTGGAGGQTVRAT
TGTAIHQALCGRASSSTPITIEVEGTINHGNTSKVSGDSCNTAADKIELKQISNVTLVGV
GNGAVFDQLGIHIREASNIVIQNVTVRNVKKSGSPTSNGGDAIGMESDVRNVWVDHTTLE
ASGGESEGYDGLFDMKANTQYVTLSYSTLRNSGRGGLIGSSESDVSNGYVTFHHNLYENI
DSRAPLLRGGTAHMYNNHYKGLSKSGINSRAGAKAKVDSNYFEDSKDVLGTFYTDAAGSW
QVSGNIYDNVTWSQPGEDNNPAGPDPQSNTSVSIPYSYPLDDASCVPDVVSATAGANKGL
KVSDGSCTPQNPDPTDPTDPTDPDPTDPPTGTNLSIGAGSDGSSKASGTSYGDVRDGDLG
TYWSPAGTTGSVSVKWSSATTVSKINIREAAGSAGTIGSYRVLNHDSGAVLASGSGAGVI
GFQAVSLKKITFEIAGASGTPRIAEFETYAG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccagtcgccctgcgactccaagcggcactcggcacgctggccctcgcggcc
gcgaccggcgtggtgctgtcgatgcccgaggcggcggcagcggccggcggcgccaccggc
tacgcgacccagaacggcggtacgaccggcggcgcgggcgggcagacggtccgggccacc
accggtaccgcgatccaccaggccctgtgcggccgcgccagcagcagcaccccgatcacc
atcgaggtcgagggcaccatcaaccacggcaataccagcaaggtgtccggcgacagctgc
aacaccgccgccgacaagatcgaactcaagcagatcagcaacgtcacgctcgtcggcgtg
ggcaacggcgccgtcttcgaccagctgggcatccacatccgggaagccagcaacatcgtc
atccagaacgtgacggtccggaacgtcaagaagtccggctcgcccacctccaacggcggc
gacgcgatcggcatggagagcgacgtccgcaacgtctgggtcgaccacaccaccctggag
gcctcgggcggcgagtcggagggctacgacggcctcttcgacatgaaggccaacacccag
tacgtcaccctgtcctacagcaccctgcgcaactcgggccgcggcgggctgatcgggtcc
agcgagagcgacgtgtcgaacggctacgtcaccttccaccacaacctgtacgagaacatc
gactcccgcgcacccctgctgcgcggcggcacggcccacatgtacaacaaccactacaag
ggcctcagcaagtccgggatcaactcccgggcgggcgccaaggccaaggtcgacagcaac
tacttcgaggactccaaggacgtcctcggcaccttctacaccgacgcggccgggtcctgg
caggtcagcggcaacatctacgacaacgtgacctggtcgcagcccggcgaggacaacaac
ccggccggtccggacccgcagtccaacacctcggtctccatcccgtactcctaccccctg
gacgacgcctcctgcgtgccggacgtcgtgagcgccaccgcgggcgccaacaagggactg
aaggtctcggacggcagctgcaccccgcagaacccggacccgaccgaccccaccgacccg
acggacccggacccgaccgacccgccgaccgggaccaacctctccatcggcgccggctcc
gacggctcctccaaggcgagcggcaccagctacggcgacgtgcgcgacggcgacctgggc
acctactggtcgccggccgggacgaccggctccgtctccgtgaagtggtcctccgccacc
acggtctcgaagatcaacatcagggaggcggcgggctccgcgggcaccatcggctcctac
cgcgtcctcaatcacgactccggtgccgtcctggcctccggcagcggcgccggggtgatc
ggcttccaggcggtctcgctgaagaagatcaccttcgagatcgccggcgcctcgggcacc
ccgaggatcgccgagttcgagacgtacgccggctag
DBGET
integrated database retrieval system
