Streptomyces sp. S6: EQG64_21385
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Entry
EQG64_21385 CDS
T07981
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
stry
Streptomyces sp. S6
Pathway
stry03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stry00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EQG64_21385 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stry03021
]
EQG64_21385 (rpoB)
03400 DNA repair and recombination proteins [BR:
stry03400
]
EQG64_21385 (rpoB)
Enzymes [BR:
stry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EQG64_21385 (rpoB)
Transcription machinery [BR:
stry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EQG64_21385 (rpoB)
DNA repair and recombination proteins [BR:
stry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EQG64_21385 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QCW78974
LinkDB
All DBs
Position
4804244..4807729
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKARVEA
ALDSGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADEPLDAGVLTTDDVIATIKYLVKLHAGETETIGESGREIVVETDDIDHFG
NRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFIETPYRKVVDGQVTDDVDYITADEEDRFVIAQANATLSDELRF
TEPRVLVRRRGGEVDYVPASEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRCATDAGDVLKAEKDGVVQEVSADYITVTNDDGTYTTYRIAK
FMRSNQGTSVNQKVVVSEGDRIVADQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLGDEWAKRLQSIGADQVAPGTNVATP
VFDGAREDEISGLFEATIPNRDGDRLVQPSGKAKLFDGRSGEPFPDPVSVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatacgaacaacggtgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaacctcctcgcgctg
cagaccgagagctttgactggctcctcggcaacgccgcctggaaggctcgcgtcgaggct
gctctggacagtggacaagacgtccccaccaagtccggcctggaggagatcttcgaggag
atctctccgatcgaggacttctccgggtcgatgtcgctcacgttccgcgaccaccgcttc
gagcccccgaagaactcgatcgacgagtgcaaggagcgcgacttcacgtacgccgccccg
ctcttcgtcacggccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgcgtcgtcgtgtcgcagctggtccgctcgccgggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccctcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tcggtcaccgtccttctcaaggctctcggctggacgaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagccgcccacccgcgaggccgct
cagacgctgctcgagaacctctacttcaacccgaagcgctacgacctcgcgaaggtcggc
cgctacaaggtgaacaagaagctcggcgccgacgagccgctggacgccggcgtgctcacc
accgacgacgtcatcgcgaccatcaagtacctggtcaagctgcacgccggtgagaccgag
acgatcggtgagtcgggccgggagatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgccgtctgcgcaacgtcggcgagctcatccagaaccaggtccgtacgggtctggcg
cggatggagcgcgtcgtgcgcgagcgcatgacgacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctctcgggtctcacccacaagcgccgt
ctctcggcgctcggcccgggtggtctctcgcgtgagcgggccggcttcgaggtccgtgac
gtgcacccgtcccactacgggcgcatgtgtccgatcgagacccctgaaggcccgaacatc
ggtctgatcggttcgctcgcctcgtacggccgcgtcaacgcgttcggcttcatcgagacg
ccgtaccgcaaggtcgtcgacggccaggtcaccgacgacgtcgactacatcaccgccgac
gaggaggaccgcttcgtcatcgcccaggcgaacgcgaccctctccgacgagctgcgcttc
accgagccgcgcgtcctggtccgccgccgcgggggagaggtcgactacgtccccgcctcc
gaggtggactacatggacgtctcgccgcgccagatggtgtccgtcgccaccgcgatgatc
cccttcctggagcacgacgacgccaaccgtgcgctcatgggcgcgaacatgatgcgtcag
gcggtgccgctgattaagtcggaggccccgctcgtcggcaccggcatggagtaccgctgc
gccaccgacgccggtgacgtgctcaaggccgagaaggacggtgtggtccaggaggtctcc
gcggactacatcaccgtcacgaacgacgacggcacgtacaccacgtaccgcatcgccaag
ttcatgcgctccaaccagggcacctcggtcaaccagaaggtcgtcgtctccgagggcgac
cggatcgtggccgaccaggtgctggccgacggccccgccaccgagaacggtgagatggcc
ctcggcaagaacctcctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgtatcggtgcc
gaggtcgtcgccggtgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acccccgaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtgcgcgac
acctcgctgaaggtgccgcacggtgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgcgaagagggcgacgagctgccgccgggcgtgaaccagctcgtccgcgtctacgtcgcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccgtcacggcaacaagggcgtc
atctccaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcggtgacgagtgggcc
aagcgcctgcagtccatcggcgccgaccaggtcgcccccggcaccaacgtcgccaccccc
gtcttcgacggtgcgcgcgaggacgagatctccggtctcttcgaggccacgatccccaac
cgcgacggcgaccgcctggtccagccctccggcaaggccaagctgttcgacggccgctcc
ggtgagccgttcccggacccggtctcggtcgggtacatgtacatcctcaagctccaccac
ctggtcgacgacaagctgcacgcgcgttcgaccggtccgtactccatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggacagcgcttcggtgagatggaggtgtgggca
ctggaggcatacggtgccgcctacgccctccaggagctgctgacgatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
gggatccccgagtccttcaaggtactcatcaaggaaatgcagtcgctctgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacacggacgaggacgtcttc
cgcgcggcggaggaactcggtatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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