Streptomyces sp. 71268: OYE22_13045
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Entry
OYE22_13045 CDS
T09829
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
strz
Streptomyces sp. 71268
Pathway
strz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OYE22_13045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strz03021
]
OYE22_13045
03400 DNA repair and recombination proteins [BR:
strz03400
]
OYE22_13045
Enzymes [BR:
strz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OYE22_13045
Transcription machinery [BR:
strz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OYE22_13045
DNA repair and recombination proteins [BR:
strz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OYE22_13045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WEV26026
LinkDB
All DBs
Position
complement(3450171..3454085)
Genome browser
AA seq
1304 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEERRTRDLPSLEAHVSVERQQVEQRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFMGGMGAAALQKRLESFDLEEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTRNSPNGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEAEREVIGE
GRSFGSTAEAIMAFDNRELSLQAKVDIRFPVGTMPPRGWSPPEPTEDEHGELTRPYQPGD
SFRLTTSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAG
FHWATRSGVTVAFSDILGPPEKPAILDEYEAKALHVQKQFERGLITRDERHQELVVIWNK
ATNEVSEAMQRNFPRTNPIFIMIESGARGNMMQMRQIAGMRGLVSNAKNETISRPIKASY
RDGLSVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLA
IATKGPDGVLRKTDDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDQLVKHGVTTVK
TRSVLTCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA
GDDITQGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKIVVTPDDGSDETSYGVS
KRARLLVGEGDHVEVGQALTLGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDK
HIEIIIRQMLRRVTIIESGDAELLPGELVERSRFENENRRVVQEGGHPASGRPQLMGITK
ASLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRV
EPTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggcctggccaccgcggacgacatt
cggcagtggtcccacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
cccgagaaggacggactcttctgcgagaagatcttcggcccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccggttcaagggcatcatctgcgagcgctgtggcgtc
gaggtcacccgcgccaaggtgcgccgcgagcggatgggccacatcgagctggccgccccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctgggctacctgctcgacctc
gcgccgaaggacctggagaaggtcatctacttcgccgcctacatgatcacctgggtggac
gaggagcgccgcacgcgcgacctgccctcgctggaggcgcacgtctccgtggagcggcag
caggtcgagcagcgccgcgacgccgacctggaggcccgggccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtccgccgcaaggtgcgcgagggc
gccgagcgtgagatgaagcagctccgcgaccgtgcccagcgcgagatcgaccgcctggac
gaggtgtggaaccgcttcaagaacctcaaggtccaggaccttgagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttcatgggtggcatgggcgccgccgcg
ctgcagaagcgcctggagtccttcgacctggaggaggaggccgagcggctgcgggagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcggctcaaggtcgtctcg
gcgttcctgcagacccgcaacagccccaacggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacctcggacctg
aacgacctgtaccgccgcgtcatcaaccggaacaaccgtctcaagcgtctccttgacctc
ggcgcccccgagatcatcgtgaacaacgagaagcggatgctccaggaggccgtcgacgcc
ctgttcgacaacggccgccgcggccgtccggtcaccggcccgggcaaccgcccgctgaag
tccctgagcgacatgctcaagggcaagcagggtcgtttccggcagaacctgctcggtaag
cgcgtcgactactcggcccgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgtggtctgcccaaggccatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcggtcgc
accgtggtgtacgacgtgctcgaagaggtcatcgccgaacacccggtgctcctcaaccgc
gcgcccaccctgcaccgcctcggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtgtgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccggccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacgaggcggagcgcgaggtcatcggtgag
ggccggtccttcggttcgaccgccgaggcgatcatggcgttcgacaaccgggagctctcc
ctccaggccaaggtggacatccgcttcccggtcggcaccatgccgccgcggggctggtcc
ccgccggagccgacggaggacgagcacggcgagctgacccggccgtaccagccgggcgac
agcttccggctgaccacctcgctgggccgcgcgctcttcaacgagctgctgcccgaggac
tacccgttcgtcgactactcggtgggcaagaagcagctctccgagatcgtcaacgacctg
gccgagcgctaccccaaggtcatcgtggcggcgacgctggacaacctgaaggcggccggc
ttccactgggccacccgctcgggcgtgaccgtcgcgttctccgacatcctcggcccgccg
gagaagccggcgatcctggacgagtacgaggccaaggcgctgcacgtccagaagcagttc
gagcgcggtctgatcacccgggacgagcgtcaccaggagctcgtggtcatttggaacaag
gcgaccaacgaggtctccgaggccatgcagcggaacttcccgcgcaccaacccgatcttc
atcatgatcgagtccggcgcgcgcggaaacatgatgcagatgcgtcagatcgccggtatg
cgtggtctggtgtccaacgccaagaacgagaccatctcgcgtccgatcaaggcgtcctac
cgtgatggcctctccgttctggagtacttcatcgccacccacggtgcccgtaagggtctc
gcggacaccgccctgcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtc
tcgcaggacgtgatcatccgcgaggaggactgcggcaccgagcgcggcctcaagctggcc
atcgccaccaagggcccggacggcgtgctgcgcaagacggacgacgtcgagaccagcgtg
tacgcgcggatgctcgccgaggacgtcgtggtggacggcaaggtcatcgcgccggccaac
gtcgacctgggcgatgtcctcatcgaccagctcgtcaagcacggcgtgaccacggtcaag
acccgctcggtcctcacctgcgagtccgccgtcggcacctgcgccttctgctacggccgc
tcgctggccaccggcaagctggtggacatcggcgaggccgtcggcatcatcgcggcccag
tccatcggtgagcccggcacccagctcacgatgcgtaccttccacaccggtggtgtggcc
ggtgacgacatcacccagggtctgccgcgtgtcgtcgagctcttcgaggcccgtacgccc
aagggtgtcgcccccatctcggaggcggccggtcgggtgcgcatcgaggagaccgagaag
accaagaagatcgtcgtcaccccggacgacggctccgacgagacgtcgtacggcgtctcg
aagcgagcccgactcctggtcggcgagggcgaccacgtcgaggtgggccaggcgctgacc
cttggcgccaccaacccgcacgacgtgctgcgcatcctcggccagcgtgccgtgcaggtg
cacctggttggcgaggtccagaaggtctacaactcgcagggtgtgtcgatccacgacaag
cacatcgagatcatcatccggcagatgctgcgccgcgtgacgatcatcgagtccggcgac
gcggagctgctgccgggcgagctggtggagcgctcgcgcttcgagaacgagaaccgccgc
gtggtgcaggagggtggtcacccggcctcgggtcgtccgcagctcatgggcatcaccaag
gcctcgctggccaccgagtcgtggctgtcggcggcgtccttccaggagacgacccgggtg
ctcaccgacgcggcgatcaacgccaagtcggactccctgatcggcctcaaggagaacgtc
atcatcggtaagctcatcccggccggtacgggcctgtcccgctaccgcaacatccgggtc
gagccgaccgaggaggccaaggccgcgatgtactcggccgtcggctacgacgacatcgac
tactcgcccttcgggacgggttcgggtcaggccgtcccgctggaggactacgactacggt
ccgtacaaccagtag
DBGET
integrated database retrieval system
