Streptomyces sp. Sge12: B6R96_15025
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Entry
B6R96_15025 CDS
T11356
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
stsg Streptomyces sp. Sge12
Pathway
stsg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stsg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B6R96_15025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stsg03021
]
B6R96_15025
03400 DNA repair and recombination proteins [BR:
stsg03400
]
B6R96_15025
Enzymes [BR:
stsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B6R96_15025
Transcription machinery [BR:
stsg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B6R96_15025
DNA repair and recombination proteins [BR:
stsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B6R96_15025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ARE75108
LinkDB
All DBs
Position
complement(3430220..3433702)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAASRNASTNTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKSRVESA
LESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPAKNSVDECKERDFTYAAPL
FVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSIDK
TSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEFG
EYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVGR
YKVNKKLGADEPLDAGVLTTDDVIATIKYLVKLHAGETETTGESGRSIVVETDDIDHFGN
RRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQ
LSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIG
LIGSLASYGRVNAFGFVETPYRKVIDGVVTDEVDYLTADEEDRFVIAQANAGLSEDMRFT
ENRVLVRRRGGEIDYIAGDDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQA
VPLIKAEAPLVGTGMEYRCAVDAGDSIRAEKDGVVQEVSADYITVANDDGTYTTYRVAKF
SRSNQGTSVNQKVIVNEGDRIIESQVLADGPATEEGEMALGKNLLVAFMPWEGHNYEDAI
ILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGAD
VVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDR
EEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVDI
ILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLAEDWAERLKVIGADRVEPGTNVATPV
FDGAREDELAGLFEHTIPNRDGDRLVLPSGKARLFDGRSGEPFPDPISIGYMYILKLHHL
VDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDV
TGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVFR
AAEELGIDLSRREPSSVEEV
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccaatacgaacaacggtgccagcaccgccccgctg
cgcatctcctttgcaaagatcaaggagcccctcgaggttccgaacctcctggcgctgcag
accgagagctttgactggcttctcggcaatgccgcctggaagtctcgcgtcgagtcggcg
cttgagagtggacaggacgtccccaccaagtccggtctggaagagatcttcgaggagatc
tcgccgatcgaggacttctccgggtcgatgtcgctgaccttccgcgaccaccgtttcgag
ccggcgaagaactctgtcgacgagtgcaaggagcgcgacttcacgtacgcggctccgctg
ttcgtcactgccgagttcacgaacaacgagaccggagagatcaagtctcagacggtcttc
atgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgagcgt
gtcgtcgtgtcgcagcttgtccgttcccccggtgtctacttcgactcctcgatcgacaag
acgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctggag
atggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcagtcc
gtcaccgttctcctgaaggctctcggctggaccaccgagcagatcctggaggagttcggc
gagtacgagtccatgcgcgccaccctggagaaggaccacacccaggggcaggacgacgcg
ctgctcgacatctaccgcaagctgcgtccgggcgagccgccgacccgtgaggccgctcag
acgctgctcgagaacctctacttcaacccgaagcgctacgacctcgccaaggtcggccgc
tacaaggtgaacaagaagctcggcgccgacgagccgctggacgccggcgtgctcaccacg
gacgacgtcatcgcgacgatcaagtacctggtcaagctgcacgccggcgagaccgagacg
accggcgagtccggccgttcgatcgtggtcgagaccgatgacatcgaccacttcggcaac
cgtcgtctgcgcaacgtcggcgagctcatccagaaccaggtccgcacgggtctggctcgt
atggagcgcgtcgtccgcgagcgcatgacgacccaggacgtcgaggccatcacgccgcag
accctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagccag
ctgtcgcagttcatggaccagaacaacccgctctcgggcctgacccacaagcgccgcctg
tcggcgctgggccccggcggtctgtcccgtgagcgggccggcttcgaggtccgtgacgtt
cacccgtcgcactacggccgcatgtgcccgatcgagacccctgaaggcccgaacatcggt
ctgatcggctcgctcgcctcctacggccgcgtcaacgcgttcggtttcgtcgagaccccg
taccgcaaggtcatcgacggtgtcgtcaccgacgaggtcgactacctcacggccgacgag
gaagaccgcttcgtcatcgcccaggccaacgccggcctgtccgaggacatgcgcttcacc
gagaaccgcgtgctggtgcgccgtcgtggcggcgagatcgactacatcgccggcgacgac
gtcgactacatggacgtctccccgcgccagatggtgtccgtcgcgaccgcgatgatcccc
ttcctggagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgccaggcc
gttccgctcatcaaggcggaggccccgctcgtcggcaccggcatggagtaccgctgtgcg
gtcgacgccggtgactcgatccgtgcggagaaggacggtgtcgtccaggaggtctcggcc
gactacatcaccgtcgccaacgacgacggcacgtacaccacgtaccgcgtcgccaagttc
tcccgctcgaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggtgaccgg
atcatcgagtcccaggtcctcgccgacggaccggcgaccgaagagggcgagatggccctc
ggcaagaacctgctcgtcgcgttcatgccgtgggaaggtcacaactacgaggacgcgatc
atcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggagcac
gaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccgaac
gtctccgaggaggtcctcgcggacctcgacgagcgcggcatcatccgcatcggtgcggac
gtcgtcgccggcgacatcctggtcggcaaggtcacgcccaagggtgagaccgagctgacc
ccggaggagcgcctgctccgcgcgatcttcggtgagaaggcccgcgaggtgcgtgacacc
tcgctcaaggtccctcacggtgagatcggcaaggtcatcggtgtccgcgtcttcgaccgc
gaggagggcgacgagcttcctccgggcgtgaaccagctggtccgcgtctacgtcgcccag
aagcgcaagatcaccgacggcgacaagctcgccggccgccacggcaacaagggtgttatc
tccaagatccttccgatcgaggacatgcccttcctggaagacggcacgccggtcgacatc
atcctgaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatccac
ctcggctggctcgccagccgcggctgggacgtctccggcctggccgaggactgggccgag
cgtctgaaggtcatcggggccgaccgtgtcgagcccggtaccaacgtcgccaccccggtg
ttcgacggtgcccgcgaggatgagctcgccggcctcttcgagcacaccatcccgaaccgc
gacggcgaccgcctggtcctgccgtccggcaaggcgcgcctgttcgacggccgctccggc
gagccgttcccggacccgatctcgatcgggtacatgtacatcctcaagctccaccacctg
gtcgacgacaagctccacgcccggtcgaccggtccgtactcgatgatcacgcagcagccg
ctgggtggtaaggcacagttcggtggccagcgcttcggtgagatggaggtgtgggcgctc
gaggcttatggcgccgcttacgccctccaggagctgctgaccatcaagtccgacgacgtc
accggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccgggc
attcccgagtccttcaaggtgctcatcaaggaaatgcagtcgctctgcctcaacgtggag
gtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttccgc
gcggcggaggagctcggtatcgacctgtcccggcgtgagccgagcagcgtcgaagaggtc
tga
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