Streptomyces tubercidicus: STRTU_001179
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Entry
STRTU_001179 CDS
T09099
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STRTU_001179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stud03000
]
STRTU_001179
03400 DNA repair and recombination proteins [BR:
stud03400
]
STRTU_001179
Enzymes [BR:
stud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
STRTU_001179
Transcription factors [BR:
stud03000
]
Prokaryotic type
Helix-turn-helix
AraC family
STRTU_001179
DNA repair and recombination proteins [BR:
stud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STRTU_001179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HHH
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WAU11024
LinkDB
All DBs
Position
complement(1386211..1387683)
Genome browser
AA seq
490 aa
AA seq
DB search
MHTDTERCLRAVQSKDARFDGWFYTAVLTTRIYCRPSCPVVPPKPENMRFYPSAAAAQQA
GFRACKRCRPDASPGSPEWNERADLVARAMRLIADGIVDREGVPGLADRLGYSTRQIERQ
LLAELGAGPLALARAQRAQTARLLVETTALPMAEVAFAAGFASIRTFNETVREVFALSPS
ELRQRARPGPRATVPGALALRLPFRQPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLNLP
YGHGIVALSPRPDHIDCRLSLTDLRDLAGAIARCRRMLDLDADPEAVDGLLREDPRLTPL
VDKAPGRRVPRTVDADEFAVRAVLGQQVSTAAARTHAGRLVRAHGEPVDDPDGGLSHLFP
STAALAGLDPEQLAMPRTRRTTLTGVIAALGSGALQLGVGSDRDAARAQLAALPGIGPWT
VECIAMRALGDPDAFTPTDLGLRRAAAGLGLPHTPAALIRHSALWRPWRAYAVQYLWATD
DHPINHLPTN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgtctgcgcgccgtgcagtccaaggacgcccgcttcgac
ggctggttctatacggccgtcctcacgacccgtatctactgccgtcccagctgccccgtg
gtgcctcccaagccggagaacatgcgcttctacccgagcgcggccgctgcccagcaggcc
ggtttccgggcctgcaagcgatgccgcccggacgccagcccggggtccccggagtggaac
gagcgggccgacctcgtcgcccgcgccatgcggctgatcgccgacggcatcgtcgaccgc
gagggcgtccccggactcgcggaccggctcggctacagcacccggcagatcgagcggcag
ctgctggccgagctgggggcggggccgctcgcgctggcccgcgcccagcgtgcgcagacc
gcccggctcctggtggagaccaccgcactgccgatggccgaggtcgccttcgccgccggt
ttcgccagcatccggaccttcaacgagacggtacgggaggtcttcgcgctctccccgtcg
gagctgcggcagcgcgcacggccgggcccccgggcgacagtgcccggtgcgctcgcgctg
cggctgcccttccggcagccgctgaaccccgacaacctcttcggacatctcgccgccacc
gcggtccctggcgtcgaggagtggcgggacggcgcctaccgccggaccctgaacctcccc
tacgggcacggcatcgtggccctctcgccccgccccgaccacatcgactgccgcctctcc
ctcaccgatctgcgcgatctggccggtgccatcgcccgctgccgccggatgctcgacctc
gacgcggacccggaagccgtcgacgggctcctccgcgaggacccacggctgaccccactc
gtcgacaaggcgcccggccgacgggtcccgcggacggtcgacgccgacgaattcgcggtc
cgcgccgtcctcggccagcaggtctccaccgcggcggcccgtacccacgccgggcggctg
gtccgtgcccacggcgaaccggtcgacgacccggacggcggcctcagccacctcttcccg
tccaccgccgcgctcgccgggctggacccggagcagctggcgatgccccgcacccgccgg
accacgctcaccggcgtgatcgccgccctcggctccggtgcgctgcaactgggcgtcggc
agcgaccgggacgccgcacgggcgcagctcgcggcgctgcccggcatcggcccctggacc
gtcgagtgcatcgcgatgcgcgcgctcggcgacccggacgccttcaccccgaccgacctc
ggtctgcgccgcgcggccgccggcctcggcctgccgcacaccccggcggccctcatccgg
cactccgccctctggcgcccttggcgcgcctacgctgtccagtacctctgggcgaccgac
gaccaccccatcaaccacctcccgacgaactga
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