Streptomyces sp. VB1: OH133_33635
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Entry
OH133_33635 CDS
T11054
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OH133_33635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_33635
Enzymes [BR:
stvb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OH133_33635
DNA repair and recombination proteins [BR:
stvb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OH133_33635
Prokaryotic type
OH133_33635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UZI32631
LinkDB
All DBs
Position
7551112..7551795
Genome browser
AA seq
227 aa
AA seq
DB search
MTDIDLLPESWRAVLGEELQKPYVKELADFVEEERAKGPVYPPREQVFAALDATPYEKVK
VLVLGQDPYHGEGQGHGLCFSVRPGVRTPPSLRNIYKEMQQELGLPIPDNGYLMPWAEQG
VLLLNAVLTVRAGEANSHKNKGWEKITDAVIRAVADRPDPAVFVLWGNYAQKKLPLIDEE
RHIVVKGAHPSPLSAKKFFGSRPFTQINEAVAAQSHQPIDWRIPDLG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatatcgacctgctgcccgagtcctggcgtgccgtcctcggcgaagaactccag
aagccgtacgtcaaggaactggccgacttcgtcgaggaggagcgggccaaggggcccgtg
tatccgccgcgcgagcaggtcttcgcagccctggacgccacgccgtacgagaaggtgaag
gtcctcgtcctcggtcaggacccgtatcacggcgagggacagggacacgggctctgcttc
tccgtgcgccccggtgtcaggactccgccgtcgctgcgcaacatctacaaggagatgcag
caggagctcggcctgccgatcccggacaacggctatctgatgccctgggccgagcagggc
gtcctcctgctgaacgccgtgctcaccgtccgggccggcgaggccaactcccacaagaac
aagggctgggagaagatcaccgacgcggtgatccgcgccgtcgccgaccggcccgacccg
gcggtcttcgtgctctggggcaactacgcgcagaagaagctgcccctgatcgacgaggag
cgccacatagtggtgaagggcgcgcacccctcgccgctctccgccaagaagttcttcggc
tcccgccccttcacccagatcaacgaggccgtggccgcccagagccaccagccgatcgac
tggcggatccccgacctcggctga
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