Streptomyces sp. YIM 121038: C9F11_32075
Help
Entry
C9F11_32075 CDS
T11066
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
styi Streptomyces sp. YIM 121038
Pathway
styi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C9F11_32075 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
styi03000
]
C9F11_32075 (alkA)
03400 DNA repair and recombination proteins [BR:
styi03400
]
C9F11_32075 (alkA)
Enzymes [BR:
styi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
C9F11_32075 (alkA)
Transcription factors [BR:
styi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C9F11_32075 (alkA)
DNA repair and recombination proteins [BR:
styi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C9F11_32075 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QCX80001
LinkDB
All DBs
Position
7510732..7512333
Genome browser
AA seq
533 aa
AA seq
DB search
MPTVTPSASEPRTPAEPHPAPQARDTPATAAPTGMHGDFDRCVRAVQSKDDRFDGWFFTA
VLTTRIYCRPSCPVVPPKPENMTFYPSAAACQQAGFRACKRCRPDSSPGSPEWNQRADLV
ARAMRLIGDGVVDRDGVPGLAARLGYSTRQVERQLLAELGAGPLALARAQRAQTARLLIE
TTTLPMAQIAFAAGFASIRTFNDTVREVFAHAPGELRTRAARRGRGPGGPPPAAHGTLSL
RLPFRAPLHPDNLFGHLIATAVPGVEEWHEGAYRRTLRLPYGHGVVALTPHPDHIGCRLT
LTDPRDLTLAISRCRRLLDLDADPVAVDDQLRADPLLAPLVDKAPGRRVPRTVDEAEFAV
RAVLGQQVSTAAARTHAARLVTAHGEPVDDPEGGLTHLFPAPAALAALDPDSLALPRSRR
ATLMTLVRHLADGTLRLGVENDWERARAQLTALPGFGPWTTEVIAMRALGDPDAFLPSDL
GVRRAAQGLGLPHTPAALTARAAAWRPWRAYAVQYLWATDDHAINHIPAHPGR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgtgacgcccagcgcatccgagccgcgtacgcccgccgagccgcacccggca
ccgcaggcgcgggacaccccggcgaccgccgcgcccaccgggatgcacggggacttcgac
cgctgcgtgcgggccgtgcagtccaaggacgaccggttcgacggatggttcttcaccgcc
gtcctgaccacccggatctactgccgccccagctgccccgtcgtaccgcccaagcccgag
aacatgacgttctacccgagcgccgccgcctgccagcaggccgggttccgcgcctgcaag
cggtgccgccccgacagcagccccggctcacccgagtggaaccagcgcgccgacctcgtc
gcccgcgccatgcgcctcatcggcgacggcgtggtcgaccgcgacggcgtgccaggactc
gccgcacgcctcggctacagcacccgccaggtcgagcgccagctcctcgccgagctcggc
gccgggcccctcgcgctcgcccgcgcccagcgcgcccagaccgcgcggctgctcatcgag
acgaccacgctgcccatggcgcagatcgccttcgccgcgggcttcgcctccatccgcacg
ttcaacgacaccgtccgcgaggtcttcgcgcacgccccgggcgagctgcgcacccgcgcc
gcccgccgcggccgcggccccggcggaccgccgcccgccgcccacggcacgctctcgctg
cggctgccgttccgggccccgctccaccccgacaacctcttcggccacctcatcgcgacc
gccgtacccggcgtcgaggagtggcacgagggcgcgtaccgccgcaccctgcgcctgccg
tacgggcacggcgtcgtcgcgctcaccccgcaccccgaccacatcggctgccgcctcacc
ctcaccgacccgcgcgacctgaccctcgccatcagccgctgccgcaggctcctcgacctg
gacgccgaccccgtcgccgtggacgaccagctgcgcgccgacccgctgctcgcgcccctc
gtcgacaaggcgccggggcggcgcgtgccgcgcaccgtggacgaggccgagttcgcggtc
cgcgcggtgctcggccagcaggtgtccacggccgcggcccgcacccacgccgcgcgcctg
gtcaccgcgcacggcgagccggtcgacgaccccgagggcggcctcacccatctgttcccg
gcccctgccgcgctcgccgcgctcgaccccgactccctcgcgctgccccgcagccgccgc
gccaccctcatgaccctcgtacgccatctcgccgacggcacgctccggctcggcgtggag
aacgactgggagcgggcccgcgcccagctcaccgcgctgccgggcttcggcccctggacc
accgaggtcatcgcgatgcgggcgctcggcgaccccgacgccttcctgccgtccgacctc
ggagtccgccgcgccgcccagggcctcgggctgccgcacacgcccgccgcgctcaccgcc
cgcgcggcggcctggcgcccctggcgggcgtacgccgtccagtacctgtgggcgacggac
gaccacgccatcaaccacatccccgcgcaccccgggcgctga
DBGET
integrated database retrieval system
