Sulfurimonas autotrophica: Saut_0318
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Entry
Saut_0318 CDS
T01316
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sua
Sulfurimonas autotrophica
Pathway
sua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Saut_0318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sua03021
]
Saut_0318
03400 DNA repair and recombination proteins [BR:
sua03400
]
Saut_0318
Enzymes [BR:
sua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Saut_0318
Transcription machinery [BR:
sua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Saut_0318
DNA repair and recombination proteins [BR:
sua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Saut_0318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
INO80F
DUF3835
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ADN08367
UniProt:
E0UU58
LinkDB
All DBs
Position
290771..294916
Genome browser
AA seq
1381 aa
AA seq
DB search
MLNTLYSGNRLRVDFSKTPQEIEVPNLLQLQQSSYDTFLMLHAKNRSQSGIEKVFQSVFP
IHDAQNRLTVEYIESEVTNPKYTVRECMERGLTYAVSLRMKTRLILWERDENTKEKLGVA
DIKEQSIFVRDIPLMTERTSFIINGVERVVVNQLHRSPGVIFKEEESSTAGNKLIYTGQI
IPDRGSWLYFEYDPKDILYMRINKRRKVPVTIMFRALGYSKQDILKLFYPIQTIKIHDNM
FSIDFNPKDYASRISYDLIDMNDKVLVSSGKRLSSKKAQKLLDDGVKEVQYPLEILLERY
LAESIIDPETGEVLFDTMTHIDETKLKKMAEIGVTEFKIANDIAEGVDSSIINAFNADAD
SLKLLKQTEEIEDENDLAAIRIYKVMRPGEPVTKEAAKIFVNQLFFDPERYDLTQVGRMK
MNHKLGMNIPEYVTVLTHEDIIESVKYVIKVKNGQGHLDDRDHLGNRRIRSIGELLGNEL
HNGLVKMQKAIRDKLSTMSGPMNELMPHDLINSKMITSTIMEFFSGGQLSQFMDQTNPLS
EVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLAMYAKVN
EHGFIEAPYKVMKDGKVTHEIVYLTATQEEGKMIAAASNKLDENGQFIEDLIAVRQDGEI
LLRDPKECEYADLSSQMVIGVAASLIPFLEHDDANRALMGSNMQRQAVPLLRANAPMVGT
GIEKLVARDAWECVKAKRAGKIEKVDGKHIYVMGEEDGEIFIDYYPLQKNLRTNQNTSFT
QKPIVKIGEMVEKGQIIADGPNMDQGELALGVNAMVAFMPWNGYNFEDAIVISERLIRQD
AFTSVHIYEKEVEARELKHGVEEITRDIPNVRDDELAHLDESGIVKIGTTVSGGMILVGK
VSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYCPPSMEGVVVDIKVFTKKGYDKDPRAL
ELEKEERDYLEREHYDRLIMIDKEEMLRVTKLLTREPLQSDIKIGDTEYKAGDTINGDDL
KEVNRFAMNAIVKSFSQEIQDEYNKTKNHFQKQKRIFRDEHEEKLTILEKDDILPNGVVK
YVKIYIATKRHLKVGDKMAGRHGNKGIVSNIVPEVDMPYMEDGRSVDVCLNPLGVPSRMN
IGQILEMHLGMAGRELGNQIQEQFEAKQKDFIDDLRAKMIEIADVAGMMHASKVIGEMDD
ETFLKYARDWSKGVKFATPIFEGTDAKEFEKLYELAKMDSDGKRVLYDGKTGEKMKERVN
VGYMYILKLHHLVDEKIHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGASAV
LKEMLTIKSDDVDGRVRAYKALTKGELVPESGIPETLFVLTKELQALALDVEIMDEVEDD
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacactttatattccggaaaccgtcttcgtgtagacttctctaaaactcctcaa
gaaattgaagtaccaaatttactccaactgcaacaaagttcatatgacacatttttgatg
ttacatgcaaaaaacagaagccaaagcggtattgaaaaagtatttcaatcagtatttcct
attcatgatgcacaaaacaggttaactgttgagtatattgagtcagaagtaacaaatcca
aaatatacagttcgtgagtgtatggagagagggcttacatatgcagtaagtcttagaatg
aaaactcgtcttatcttatgggaaagagatgaaaatacaaaagaaaagcttggtgtagca
gatattaaggaacaaagtatatttgttcgtgatattccattaatgacagaaagaacatca
tttataatcaatggtgttgaacgtgttgttgtaaatcaacttcaccgctcaccgggtgtt
attttcaaagaagaagaatcttctacagcaggaaataaactgatctatactggtcaaatc
attccagaccgcggttcatggttgtattttgaatatgatcctaaagatattctttacatg
agaattaacaaacgccgtaaagtgcctgtaacaataatgttccgtgctttaggctattct
aaacaagatattttaaaactgttttacccaattcagacaataaaaatacatgataatatg
ttctctatagatttcaaccctaaagattatgcgtcacgtatctcttatgatttgattgat
atgaatgacaaagtactagtatcttcaggaaaaagactctcatctaaaaaagcacaaaag
cttttagatgacggtgtaaaagaagttcaatatccactagaaatacttttagaaagatat
cttgctgaatcgattattgaccctgaaaccggtgaagttctttttgatacaatgactcat
atcgatgagactaaattaaagaaaatggctgaaattggtgtcactgagtttaaaatcgca
aatgatatagcagaaggtgttgacagttctataatcaatgcattcaatgctgatgcagat
tcactcaaacttttaaagcaaacagaagaaattgaagatgaaaacgacttagctgcgatt
cgtatatataaagttatgcgtccgggtgagcctgttacaaaagaggctgcaaaaatattt
gtaaatcaacttttctttgatcctgaaagatatgatttgactcaggttggtcgtatgaaa
atgaatcataagttaggaatgaatattccggaatatgtaacagttttaacacatgaagat
attattgaatctgtgaaatatgttataaaagttaaaaacggtcaggggcacttagatgac
agagatcacttaggtaaccgtcgtattcgttctatcggtgagcttttaggaaacgagtta
cacaatggtcttgtaaaaatgcaaaaagcgattcgtgacaaactctctactatgagtgga
ccgatgaatgagcttatgccgcatgatttgattaactcaaaaatgattacgtctacaatt
atggaattcttttccggtggacagctttctcagtttatggatcaaacgaatccgctctct
gaggtaacccacaaacgtcgtctttcagcactcggtgaaggtggtcttgttaaagagaga
gccggctttgaagtgcgggatgttcaccctactcactatggtagaatatgcccggttgag
actccagagggtcaaaatatcggtcttatcaatacacttgcaatgtatgcaaaagtaaat
gagcatggtttcattgaagcaccatacaaagttatgaaagatggaaaagttacacatgaa
attgtttacctgactgcaacgcaggaagagggcaaaatgattgctgctgcttcaaataaa
cttgatgaaaatggtcagtttattgaagacttgattgctgtaagacaagatggtgaaatt
cttttaagagatccaaaagagtgtgaatatgctgacctttcttctcaaatggttatcggt
gtggcagcttctcttattccattcttggaacatgatgatgccaaccgtgcacttatggga
tcaaatatgcagcgtcaggctgtccctcttttacgtgcaaatgctccaatggttggaaca
ggtattgaaaaacttgttgcccgtgatgcatgggagtgtgtaaaagcaaaacgtgcaggt
aaaatagaaaaagttgacggaaaacacatctatgtaatgggtgaagaagatggagaaatt
tttatcgattactatccattacaaaaaaatcttcgtaccaaccaaaatacatcatttaca
caaaaaccgattgtaaaaatcggagaaatggtagaaaaaggtcaaataattgctgatggt
ccgaatatggatcagggggaacttgcactcggtgtaaatgctatggttgcctttatgcca
tggaatggatacaactttgaggatgcgattgttatctcagagcgtttaattcgccaagat
gcatttacttcagtacatatttatgaaaaagaagtcgaagcacgtgaacttaaacacggt
gtcgaagagattactcgtgacattccaaatgtgcgtgatgatgaattggctcatttagat
gaaagcggtattgttaaaatcggtacaactgtgagtggaggtatgattttagtagggaaa
gtttctccaaaaggtgaagtgaagccaactcctgaagagcgtcttttacgtgcaattttt
ggtgaaaaagccggacatgttgtcaataaatcactctactgcccaccgtcgatggagggt
gttgttgtagatattaaagtatttacgaaaaaaggctatgacaaagatcctcgtgcattg
gaacttgaaaaagaagagagagattatttagagcgtgagcattatgacagacttatcatg
attgataaagaagagatgcttcgtgttacaaaacttttaactcgtgaaccattgcaaagt
gacattaaaataggtgatactgagtataaagcaggagacacaattaatggagatgattta
aaagaagtgaatcgttttgctatgaatgcgattgttaaatctttttcacaagagatacag
gatgagtacaacaaaacgaaaaatcatttccaaaagcaaaaaagaatttttagagatgag
catgaagaaaaattaacgattttagaaaaagatgacatcttaccaaacggtgtagtgaag
tatgtaaaaatttacatcgctacaaaacgtcacctcaaagtcggtgataaaatggcaggt
cgtcacggaaataaaggtatcgtttcaaatattgttccggaagttgatatgccgtatatg
gaagacggacgtagtgttgatgtgtgtctgaatccgcttggtgtaccttctcgtatgaat
atcggtcagattttggagatgcaccttggtatggcaggacgtgagcttggaaaccagatt
caagagcagtttgaagcaaaacaaaaagattttatagatgatcttcgtgcaaaaatgatt
gaaatagcagatgtagcaggaatgatgcatgcaagcaaagtaatcggtgaaatggatgat
gagactttcttaaaatatgcaagagactggtcaaaaggtgtgaaattcgcaacacctatt
tttgaaggtacagatgcaaaagagtttgaaaaactttatgaactggcaaaaatggacagt
gacggtaaacgcgttttatatgatggaaaaacgggtgagaagatgaaagagcgtgtaaat
gtcggttacatgtatatcttgaaactgcaccacttggttgatgaaaaaattcacgcacgt
tcaacaggaccatattcacttgttacacaacaaccggtcggcggtaaagcactctttggt
ggacaaagatttggtgagatggaagtctgggctcttgaagcatatggagcatcagcagtt
ctaaaagagatgttgactatcaaatcagatgatgttgatggtcgtgtacgtgcgtataaa
gcacttacaaaaggtgagttagtaccagaatctggtattcctgaaacactatttgtatta
acaaaagagcttcaagcattggctcttgatgtagagattatggacgaggtagaagacgat
gagtaa
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integrated database retrieval system
