Sulfurimonas autotrophica: Saut_0551
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Entry
Saut_0551 CDS
T01316
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sua
Sulfurimonas autotrophica
Pathway
sua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Saut_0551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sua03400
]
Saut_0551
DNA repair and recombination proteins [BR:
sua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Saut_0551
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Saut_0551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
Microtub_bd
Selenoprotein_S
HTH_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADN08600
UniProt:
E0UPK8
LinkDB
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Position
529219..531201
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AA seq
660 aa
AA seq
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MKNKVNFEVVSPYQPAGDQPKAIELLTDSILKGNRYQTLEGVTGSGKTHTMARVIENVKM
PTIIMTHNKTLAAQLYSEFRQFFPNNHVEYFVSYYDYYQPEAYIPRQDLFIEKDSAINDE
LERLRLSATANLLSYDDVIVIASVSANYGLGDPEEYQNMVQSLAVGDEIAQKKLLLRLVE
MGYSRNDTYFDSGHIRVNGESIDIYPPYFEQEAIRVEFFGDEIEAIYTFDVIDNKKLEEH
KSVTIYATSQFSVSQEKMSVAIKRIEEELDERLAYFQKEGKLLEYQRLKQRVEFDLEMLQ
TTGMCKGIENYSRLLTNKKPGEAPFTLLDYFEQNHKEYLVIVDESHVSLPQYRGMYAGDR
ARKEVLVDYGFRLPSALDNRPLKADEYINKAPHYLFVSATPAEYELEMSVAKAEQIIRPT
GLLDPVIEIKPSDNQVEDIHDEIKKTVVKDERVLITVLTKKMAEALTKYLADLGIKVQYM
HSDIDTIERNQIIRSLRLGEFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSETALV
QTIGRGARNENGRVILYANKMTGSMQRAIDKTTARREIQEAYNKEHGITPKTTKRTLDEN
LKLEDHGDIYQKYKKQDKIPPSERKAMVKELSLKMKQAAKELNFEEAARLRDEITKIKKL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaagtaaattttgaggtcgtttcaccttatcaacctgcaggtgaccaacct
aaagccatagaactattaacagactctatacttaaagggaatcgttaccagacacttgag
ggtgtgacgggatcaggtaaaacacatactatggcacgtgtcatagagaatgtgaagatg
ccgactattataatgacgcataacaaaactttggccgcgcagttgtactcagagtttcgt
caattttttccaaacaatcatgttgagtattttgtgtcctattatgattattatcagcct
gaggcttacatacctcgtcaggatttgtttatagaaaaagattctgctattaacgatgaa
ctggaacgcttacgtcttagtgcgactgcaaatctgctctcttatgatgatgtaatcgtt
attgcttcagtatctgccaattatgggcttggtgaccccgaagagtaccaaaatatggtg
cagtctttggcagtcggtgatgaaatagcacaaaaaaaactcttacttcgtttagttgaa
atggggtattctagaaatgacacctattttgacagcggtcatattcgagtcaacggggaa
agcatagatatatatccgccttattttgaacaagaagctatacgtgttgaatttttcggt
gatgagatagaagccatttacacttttgatgtcattgacaataaaaagcttgaagagcat
aaaagcgttaccatctatgccacttcacagtttagtgtaagtcaggaaaaaatgtccgtg
gcgattaaacgcatagaagaagaacttgacgagcgactagcctactttcaaaaagagggt
aaactattagagtatcaaagactcaaacagcgtgtggaatttgacttggagatgctgcaa
acgacggggatgtgcaagggaattgaaaactattcaagacttttgacaaataaaaaacca
ggagaagcgcctttcacactgcttgattattttgaacaaaaccataaggagtatcttgtt
attgtcgacgaatcacatgtttctctacctcaatatcgtggtatgtatgcaggggacaga
gcgagaaaagaggtgcttgtcgattacggttttcgtctgccctcagcactcgataatcgc
cccttaaaggcagatgagtacataaacaaagcaccgcattatctttttgtatcagctacc
cctgcagagtatgagctggagatgtcagttgcaaaggctgagcagattattcgtccaaca
ggactccttgaccctgttatagagataaaaccctcagacaatcaggtagaagatatacat
gatgaaataaaaaagactgtagtaaaagatgagagagttttaataacggtactaacaaaa
aagatggcagaagcgttgacgaagtatctggcagatttaggcataaaagtacagtatatg
cactcagatattgatacaatagaacgtaaccaaattattcgttctttgcgtttgggtgag
tttgacgttcttattgggattaatcttctacgtgaagggctggatttaccagaagtctct
ttggttgcaattttggatgccgataaagagggttttttaagaagtgagacagcacttgtt
cagacaattgggcgtggtgcaagaaatgaaaacggtcgggtgattttatatgcaaataaa
atgacgggctctatgcaaagagctatagacaaaacgactgcaagaagagaaattcaagaa
gcttacaacaaagaacacggcattactccaaaaacgacaaaaagaacattagatgaaaac
ttaaaactcgaagatcacggagatatttaccaaaagtataaaaaacaagataaaatacct
ccaagtgaaagaaaagctatggtgaaagaactttcattaaagatgaaacaagcagcgaaa
gaacttaattttgaagaagcagcaagacttcgagatgaaataacaaaaataaaaaaacta
taa
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