Staphylococcus aureus subsp. aureus 71193 (MSSA): ST398NM01_1699
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Entry
ST398NM01_1699 CDS
T02043
Name
(GenBank) RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sud
Staphylococcus aureus subsp. aureus 71193 (MSSA)
Pathway
sud03410
Base excision repair
sud03430
Mismatch repair
sud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ST398NM01_1699
03430 Mismatch repair
ST398NM01_1699
03440 Homologous recombination
ST398NM01_1699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sud03400
]
ST398NM01_1699
DNA repair and recombination proteins [BR:
sud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ST398NM01_1699
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ST398NM01_1699
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ST398NM01_1699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFH69875
LinkDB
All DBs
Position
complement(1603524..1605797)
Genome browser
AA seq
757 aa
AA seq
DB search
MIKPKYKWKLTKPAEYISDELTSKLKLTPIVKKILESKSIIDEQAIESIISDTDVNHDAL
QLSDMTKAIDRIKRAIANDEKILVYGDYDADGVTSTTILVTTLQLLGAQVGWHIPNRFTE
GYGPNELAFRNAHDEGITLIITVDNGIQGHNEIKMVQDLGVDVIVTDHHEIGSILPEAYA
IVHPMHPSFNYPFQQLCGAGVAYKLAQALIENVPDYFKALVAIGTIADLVSLTDENRSLV
KQGLKVLNDQCPTSVKALLKEAGYNDNIDEETIGFIIGPRLNAVGRLDDASLACELLMTD
DEEEAAFLAEQVEHFNRERKDIVATITEEAMAMAETKVKNGDLFLLLAKENWHEGVLGIV
ASKIVETFALPTLILNIDREQNHAKGSARSIDQVSMFEILSAHQELIAKFGGHHMAAGMT
MDIENIESLAEGLNKWMKELSKTTSLDPVKPVDVLLTENDITIKNIRDMNRLRPFGTDFS
RPIFEMDDLSVSSVKAIGQQKNHLKLTLGESNIAALFWQNGHLEPELQDEQPINILGSVQ
INEWNGNQSPQIIIQDIAMNEQQILDYRSKRKSLPFTENDENIVVLIHPKSDKVNANEYY
YGEEIKQQTDKVVLRDLPMSMEDLSNSLQQLQFSQLYIVLQHNHSIYFDGIPNMDIFKKC
YKALITKQETNIQKEGMLLCEHLSVKPDTLKFMLKVFLDLKFVTQEDGLIRINQQPDKRS
IDSSKVYQLRQQRMDVEKQLLYQDFSEIKNWIKSQLS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaccgaagtataagtggaaattaactaaaccagctgaatacataagtgatgaa
ttaacatcaaaattaaagttaacgccaatcgtaaaaaaaatattagaaagtaaatcgatt
attgatgaacaagcaattgaatccatcatttcagacacagatgtcaatcatgatgcattg
caattgagcgatatgactaaggctattgatagaattaaaagagcgatagcgaatgatgag
aaaatcctagtttatggtgattacgatgccgacggtgttacctcaactacaattttagtg
acaacattacaacttttaggtgcacaagtaggatggcatattcctaaccgctttaccgaa
ggatatggaccaaacgaactagcatttagaaatgctcatgatgaaggcataacattaatc
ataactgttgataatggcatacaaggtcataatgaaattaaaatggttcaagatttagga
gttgatgtcattgtaactgatcatcatgaaattggtagtatattaccagaagcatatgca
atcgtacatccaatgcatccatcgtttaattatccgttccaacaattgtgtggtgcaggt
gttgcgtacaaattagcacaagcattgattgaaaatgtacctgattattttaaagcatta
gttgcgataggtaccattgcggacttagtatccttaactgatgaaaatcgatcattagtg
aaacaaggattaaaagtcttaaatgatcaatgtccgacctctgttaaagcattgctaaaa
gaagcgggatacaatgacaatattgatgaagaaacaattggttttattattggacctaga
cttaatgctgtaggtcgtttagatgacgcatcattagcttgcgaattgttgatgactgac
gacgaagaagaagctgcatttttagcagaacaagttgaacattttaaccgtgaaagaaaa
gatattgtagcaactatcacagaagaagcaatggctatggcagaaacgaaagttaaaaat
ggagatttatttttacttttagcaaaagaaaattggcatgaaggtgtcttaggtattgtt
gcttcgaaaattgtcgaaacatttgctttgccaacattaattttaaatattgatagggag
caaaatcatgcaaaaggttccgccagatcaattgatcaagtgtcgatgtttgaaatacta
tcagcacatcaagagttaatcgctaaatttggcggccatcatatggctgcaggtatgacg
atggatattgaaaatatagaatcgttagctgaaggtttaaataaatggatgaaagaatta
tctaaaacaacttcgttagatcccgtaaagccagtagatgtattattaacagaaaatgat
ataacgattaaaaatattcgtgatatgaatcgtttaagacccttcggaacagatttttct
agacctatttttgaaatggatgatttatcagtttcttcagttaaggcgataggtcaacaa
aaaaatcatctaaaattgacacttggtgaaagtaatatcgccgcgctattttggcaaaat
ggacacttagaacctgagttacaagatgaacagccaattaatatattaggatctgttcaa
atcaacgaatggaatggtaatcaatcaccgcaaataattattcaagatattgcgatgaat
gaacagcaaatattagattatagaagtaagagaaaaagtttaccttttacagaaaatgat
gaaaatattgtcgtgcttattcatcctaaaagtgataaagtaaatgcgaatgaatattat
tatggtgaagaaattaaacaacaaactgataaagtagtattaagagatttaccaatgtca
atggaagacttgtctaattccttgcaacaactgcaattttctcaactttatatagttttg
caacataatcattcgatttacttcgatggtatacctaatatggatatttttaaaaagtgt
tataaagcattaataactaaacaagaaacaaatatccagaaagagggtatgttattgtgt
gaacatttaagtgtgaaaccagatacacttaaattcatgttgaaagttttcttagactta
aaatttgtaacacaagaagatggtttaattcgaatcaatcaacaacctgataaaagatcg
attgattccagcaaagtatatcaattaagacaacaacgtatggatgttgaaaagcaatta
ttatatcaagatttttcagaaataaaaaattggataaagtcacaattgtcgtga
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