Staphylococcus aureus subsp. aureus JKD6159 (CA-MRSA): SAA6159_01979
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Entry
SAA6159_01979 CDS
T01870
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
suj
Staphylococcus aureus subsp. aureus JKD6159 (CA-MRSA)
Brite
KEGG Orthology (KO) [BR:
suj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suj03021
]
SAA6159_01979 (sigB)
Transcription machinery [BR:
suj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAA6159_01979 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
GerE
HTH_16
HTH_23
HTH_Tnp_1
HTH_3
HTH_38
KORA
HTH_28
IF2_N
DUF6761
Motif
Other DBs
NCBI-ProteinID:
ADL23904
LinkDB
All DBs
Position
complement(2138875..2139645)
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AA seq
256 aa
AA seq
DB search
MAKESKSANEVSPEQINQWIKEHQENKNTDAQDKLVKHYQKLIESLAYKYSKGQSHHEDL
VQVGMVGLIGAINRFDMSFERKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIK
KVSDELTAELERSPSISEIADRLEVSEEEVLEAMEMGQSYNALSVDHSIEADKDGSTVTL
LDIMGQQDDHYDLTEKRMILEKILPILSDREREIIQCTFIEGLSQKETGERIGLSQMHVS
RLQRTAIKKLQEAAHK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagagtcgaaatcagctaatgaagtttcacctgagcaaattaaccaatggatt
aaagaacaccaagaaaataagaatacagatgcacaggataagttagttaaacattaccaa
aaactaattgagtcattggcatataaatattctaaaggacaatcacatcacgaagattta
gttcaagttggtatggttggtttaataggtgccataaatagattcgatatgtcctttgaa
cggaagtttgaagcctttttagtacctactgtaatcggtgaaatcaaaagatatctacga
gataaaacttggagtgtacatgttccgagacgtattaaagaaattgggccaagaatcaaa
aaagtgagcgatgaactaaccgctgaattagagcgttcaccttctatcagtgaaatagca
gatcgattagaagtttcagaagaagaagttttagaagcaatggaaatgggacaaagttat
aatgcgttaagtgttgatcattccattgaagctgataaagatggttcaactgttacgcta
ttagatattatgggacaacaagatgaccattatgacttaactgaaaagcgtatgatttta
gaaaaaatattacctatattatctgatcgcgaacgagaaatcatacaatgtacgtttatt
gaaggtttgagtcaaaaagaaacgggcgagcgtatcggtttgagtcaaatgcatgtttca
agacttcaaagaacggcaattaagaaattacaagaagcagcacataaatag
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