Sulfitobacter sp. D7: B5M07_03820
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Entry
B5M07_03820 CDS
T05714
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
suld
Sulfitobacter sp. D7
Pathway
suld03030
DNA replication
suld03430
Mismatch repair
suld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5M07_03820
03430 Mismatch repair
B5M07_03820
03440 Homologous recombination
B5M07_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suld03032
]
B5M07_03820
03400 DNA repair and recombination proteins [BR:
suld03400
]
B5M07_03820
Enzymes [BR:
suld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5M07_03820
DNA replication proteins [BR:
suld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B5M07_03820
DNA repair and recombination proteins [BR:
suld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B5M07_03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AYE85312
UniProt:
A0A386TAW1
LinkDB
All DBs
Position
801080..804616
Genome browser
AA seq
1178 aa
AA seq
DB search
MSNDPRFIHLRSHSEYSLLEGALRLKKLPGMCRDAGMPALALTDTNNMFAALEFSVAMAG
AGVQPIIGCQVDIAYVEVQPGEKPRPPAPVVLLAQSELGYENLMKLNSCLYLDKGGAVAE
VTLAELEALSADLICLTGGPLGPVGMLLQGGQRPAAEALMARLQGAFGDRLYVELQRHPE
DGGQPEPERLTERGFIEMAYAMDIPLVATNDVYFPKPDMYEAHDALICIAEGAYVDQSQP
RRRLTAQHYFKSQAEMATLFADLPEALSNTVEIAKRCAFMAYRRDPILPKFADDEVAELR
RMANEGLQARLAVIPHAVSVEDYQKRLDFELGIIEGMGFPGYFLIVADFIQWAKDNDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QEKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALA
DEPRLREEAKNEEVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDHLVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNALDQIKAGGRHLHLAADGRQIYEPPEGHV
DDVATIPLDDKATYKLYSSAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGQRELESVHPSIDYILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIAEEMAKERPKFEKGAMANGVDKKKAAEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKRLELPWVPPCVNRSDATFKVVDGA
LVYALGALKNVGLEAMRLVTEGRKVDGVDKPFATLFDLARRVDLKRVGKRPLEMLVRSGA
FDQLDSNRRRVFQSLDGLVSYSAAIHEQKASNQVSLFGEAGDDLPEPRMLPCDDWQSAER
LAEEFKAVGFYLSGHPLDDYMPPLKRKWAREAGLPFLTLDELNEKVSTRGAMNARLAGVV
AGRQERKSARGNRFAFAQLSDTTGGYEVTIFSDVLEASRDHLEVGSKVVVTVEATMESDQ
LKLLARGIGPIDAAVADAGSMGLRVFIDGPGAIQSVADVLDGARQAVKAAGKGPVQFCLI
NPSLPGEVEVDLGREFPVTPQIKGAIRSLDGVMEVEEI
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgatccccgattcattcacctgcgtagccattccgagtattccttgctggag
ggcgcgctgcggttgaaaaaactgcccggcatgtgccgcgatgcgggcatgcccgcgctg
gcgctgaccgacaccaacaacatgttcgcagcactcgaattctctgtcgcgatggcgggc
gcgggtgtgcagccgatcatcggctgtcaggtcgatatcgcctatgtcgaggtgcagccc
ggtgagaaaccgcgcccgcccgcaccggtggtcctgctggcgcagagcgaattgggctat
gaaaacctgatgaagctgaactcttgcctctacctcgacaagggcggcgcggtggccgag
gtgacgctggcggagcttgaggcgctgagcgccgatctcatctgcctgacgggtggcccg
ttggggccggtggggatgcttttgcaaggcggccagcgcccggcggcagaggcgctgatg
gcccggctgcagggtgcctttggcgaccggctttatgtcgagttgcagcgccaccccgaa
gacggcggccagcccgagcccgagcgtctgaccgagcgcggctttatcgagatggcctat
gcgatggatatcccgctggttgcgaccaacgatgtctatttcccgaaaccggatatgtac
gaggcccatgacgcgctgatctgcatcgccgagggtgcctatgttgaccaaagccagccc
cgccgccgcctgaccgcgcagcattacttcaagtcgcaggccgagatggcgacgcttttc
gccgatctacccgaagcgctgagcaacactgtcgagatcgccaaacgctgcgccttcatg
gcctaccgacgcgacccgatcttgccgaagttcgccgacgatgaggtggccgaactgcgc
cgcatggccaacgaggggctacaggcgcgtctggcggtgatcccccatgcggtcagcgtg
gaggactaccaaaagcgcctcgatttcgagctgggcatcatcgaaggcatggggttcccc
ggctacttcctgatcgttgccgacttcatccaatgggccaaagacaatgacattccggtg
gggccggggcggggctcgggggcggggtcactcgtggcctatgcgctgaccatcaccgac
ctcgaccccctgcgctattcgctcctgttcgagcgtttcctcaaccccgagcgggtctcg
atgcccgacttcgacatcgacttttgcatggaccgccgcgaagaggtgatccgctatgtg
caagagaaatatggccgcgacaaggtggggcagatcatcaccttcggtgcgcttttgtcc
aaggcggcggtgcgcgatattggtcgcgtgttgcagatgccctacgggcaggtcgaccgt
ctgtcgaagatgatcccggtggaaggggtgaaacccgtctccatcgaaaaggcgctggcg
gatgagccacgcctgcgcgaagaggccaagaacgaagaggtcgtggaccgcttgctgacc
tatggccagcaggtcgaagggctgctccggaacgcctcgacccacgcggcgggtgtggtc
atcggcgaccggccgctggaccatctggtgccgctttaccaagacccgcgctcggacatg
ccagcgacgcagttcaacatgaaatgggtcgaacaggccgggctggtgaaattcgacttt
ctgggcctgaagactctcaccgtcatccaaaacgcgcttgatcagatcaaagcgggcggg
cggcatctgcacctcgccgcggatggtcgccaaatttatgagccgccagaggggcacgtg
gatgacgtggccacgatcccgctcgatgataaggcgacctacaagctttactccagcgcc
aagacggtcgcggtctttcaggtggaatccagcggcatgatggatgcgctcaagcgcatg
aagccgacctgtatcgaagacatcgtggccctcgtggcgctttaccgtcccggcccgatg
gagaacattccggtctattgcgaggtcaagaatggccagcgcgagttggaatccgtgcac
ccgtcgatcgactacatccttgaagagacccaaggcattatcgtttaccaagaacaggtg
atgcagatcgcgcaggtcatggcgggctactcgcttggcggcgcggacctgttgcgccgt
gcgatgggtaagaaaatcgccgaggaaatggccaaggagcgccccaaattcgaaaagggc
gcgatggccaatggggtcgataaaaaaaaggcggcagaggtcttcgaccttctggaaaaa
ttcgccaactacggttttaacaagtcccacgccgcggcctatgcggtggtcagctaccag
accgcttggctaaaggcgaaccatccggttgagttcatggccggggtgatgaactgcgat
attcacctcaccgacaagctggcggtttacttcgaggaagtgcgcaagcggctggaactg
ccttgggtgccgccctgcgtgaaccgctcggatgcgaccttcaaagtggtagacggcgcg
ctggtctatgcgcttggcgcgctgaaaaatgtcgggcttgaggcgatgcggctggtgacc
gaggggcgcaaggtcgacggtgtcgataagccctttgccacgctctttgatctcgcccgc
cgggtggacctcaagcgcgtgggcaagcgcccgcttgagatgctggtgcgctcgggtgcc
ttcgatcagctcgacagcaaccggcggcgggtgttccaatcgctcgacgggctggtgagc
tattcggcagcgatccatgagcagaaagccagcaaccaggtgtcgctctttggtgaggcg
ggcgacgatctgcccgaaccgcgcatgttgccctgcgacgactggcaatcggcagagcgg
ctggccgaggaattcaaggccgtgggtttctacctttcgggccatccgcttgatgactac
atgccgcccttgaaacgcaaatgggcgcgcgaggcgggcttgcccttcctcacgctggac
gaattgaacgaaaaggtcagcacccgcggcgcgatgaacgcgcggctggcgggcgtggtc
gccggacggcaagagcgcaagtcggcgcggggcaaccgctttgcctttgcgcagctttcg
gacaccacaggcggctacgaggtgacgatcttctctgacgtgctggaggcgtcgcgcgat
catctggaggtcggctccaaggtcgtcgttacggtcgaggccacgatggaaagcgaccag
ttgaagcttttggcacgcggcatcggcccgatcgacgcggcggttgcggatgcgggcagc
atgggactgcgcgttttcatcgacgggccgggggccattcaatcggtggccgatgtgctt
gatggcgcgcgtcaagcggtcaaagcggcggggaaggggccggtgcagttctgcctgata
aacccaagcctgcccggcgaggtcgaggttgatctggggcgcgagttcccggtgacaccg
cagatcaagggcgcgatccgttcgcttgatggggtgatggaggtcgaggaaatctga
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