Saccharolobus sp. E5-1-F: GFS03_10255
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Entry
GFS03_10255 CDS
T06918
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
sule
Saccharolobus sp. E5-1-F
Pathway
sule03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GFS03_10255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sule03021
]
GFS03_10255
Transcription machinery [BR:
sule03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
GFS03_10255
Prokaryotic type
Archaeal type
TFE
GFS03_10255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_20
TrmB
HTH_9
HTH_IclR
Sigma70_r3
Fe_dep_repress
GntR
WHD_RNase_R
HTH_36
HTH_24
HVO_A0114
HTH_Crp_2
DnaD_N
HTH_5
DUF4423
HTH_11
DUF7342
LexA_DNA_bind
Rrf2
EutK_C
Zn_Ribbon_TF
HTH_DeoR
RPA_C
MarR_2
CdaS_N
Zn_ribbon_10
WHD_MCM8
Mut7-C
Motif
Other DBs
NCBI-ProteinID:
QGA54932
LinkDB
All DBs
Position
1971103..1971639
Genome browser
AA seq
178 aa
AA seq
DB search
MVNAEDLFINLAKSLLGDDVIDVLRVLLEKGTEMTDEEIANQLNIKVNDVRKKLNLLEEQ
GFVSYRKTRDKDSGWFIYYWRPNIDQINEILLNRKRLILDKLKSRLEYEKNNTFFICPQD
NSRYSFEEAFENEFKCLKCGSQLTYYDTEKIKSFLEQKIRQIEEEIDKETKLGANKNH
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgcagaggacctgtttattaatctagcgaaaagtttgttaggagatgatgta
attgatgttctacgagtcctattagaaaaaggtactgagatgaccgatgaagaaatagca
aatcagctcaatataaaagttaatgacgtgagaaagaaattgaacttactagaagagcaa
ggtttcgtaagttataggaaaacgagagataaggatagcggatggttcatttattattgg
aggcctaacatagatcaaattaatgagatattattgaatagaaaaagactaatattagat
aaattaaagtccagattagaatatgagaaaaataatacgttctttatatgtccacaagat
aatagtagatactcatttgaggaagcatttgaaaatgaatttaaatgcttaaagtgtgga
tctcaattaacctattatgatacagaaaaaattaagtcgttcttggagcaaaaaataaga
caaatagaggaagagatagataaggagacaaaacttggagcaaataaaaatcattga
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