KEGG   Candidatus Sulfuricurvum sp. RIFRC-1: B649_04180
Entry
B649_04180        CDS       T02537                                 
Name
(GenBank) hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sulr  Candidatus Sulfuricurvum sp. RIFRC-1
Pathway
sulr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sulr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B649_04180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sulr03019]
    B649_04180
Messenger RNA biogenesis [BR:sulr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B649_04180
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 KH_PNO1_2nd HDOD KH_KhpA-B KH_2 dUTPase KH_NusA_C
Other DBs
NCBI-ProteinID: AFV97150
LinkDB
Position
820980..822548
AA seq 522 aa
MLNSLLVGGAVALISGLVGFLISKKITASHFDLYLEQAKAKSKAIENEAQMILERASLRS
REIEKEAQKHYDETYDQVKKDLSMREEKIERVEREFELLRHNEEEKIAHERSNVENRRLN
LERNERALEKLKEDYRQKSEQVKVIVEQRAGLSVQEAKTILLEQVREDARLDLARHMREL
DEQSKEQLKRKANYILAQATSRFAGEYAAERLISVIHLDDDELKGRIIGKEGRNIKALEM
VSGVDIIIDETPNAIIVSSFNLYRRAIAVKTIELLVQDGRIQPARIEEVYQKVCDEFDEE
MTREGEEIIFEMGLQGIHSELTKLIGRLKYRSSYGQNALAHTLEVAHLAGIMASEMGGDV
KLARRAGLLHDIGKTLTQENGGNHVDIGVELCRRYNEDPVVINAIYAHHGHEEIKSIECA
AVCAADTLSAARPGARREVLESFLRRVSEIEEIATQKAGVKQAYAINAGREVRVIVSAQS
VNDDETVLIAREIADEISQKVQFPGEIKVSVIRESRAVEYAR
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgttaaacagcctactcgtagggggcgcagttgccctcatcagcgggttagtcggattt
ttaatttcaaaaaagattaccgcctcacattttgatctttatttagaacaagcgaaagca
aaatcgaaagcgattgaaaacgaagcacaaatgattttagaacgtgcttcactgcgatcg
cgtgagatcgaaaaagaggcacaaaaacattacgatgagacgtatgatcaggtcaaaaaa
gatctctcgatgcgtgaagaaaaaattgaacgcgttgagcgtgaatttgaactgcttcgt
cacaatgaagaagagaagatagcgcacgagcgatcgaatgttgaaaatcgacgtctcaat
ttagaacgtaatgaacgtgctttagagaaattaaaagaagactaccgccaaaaaagtgaa
caagttaaggtgatcgttgaacagcgtgccggattatcggtgcaggaagcaaaaacgatt
cttttagagcaggtgcgcgaagatgcccgtttggatttagcgcgacacatgcgtgaattg
gacgaacaatccaaggaacagcttaagcgtaaagccaactatattttggcgcaagcaacg
tctcgctttgcgggagagtatgcggctgaacggctgatcagtgttatccacctcgatgat
gacgagctcaaggggcgtattatcggaaaagaggggcgcaatattaaggcgctagagatg
gtgagcggagtcgatattatcatcgatgaaacgccgaacgcgattatcgtgagttcattt
aatctctatcgtcgtgcgattgcggtaaaaacgatcgaactgttggttcaagacggtcgg
attcagcctgcacgtatcgaagaggtataccaaaaagtatgcgatgaatttgatgaggaa
atgacccgtgaaggggaagagatcatttttgagatggggttacaaggtatccattcagag
ctcactaaactgatcggacggctcaaataccgctccagttatgggcaaaatgcattggca
cataccctcgaagtagctcatctggccggaattatggcatctgagatgggaggggatgtg
aaactcgcccgtcgtgccggattactacacgatatcggtaaaactctgactcaagaaaat
ggagggaatcatgtcgatatcggcgtggaactctgtcgacgttacaacgaggacccggtg
gtgatcaacgctatttatgctcatcacggtcatgaagagatcaaaagcatcgagtgcgcc
gcagtgtgcgccgcagataccctctctgccgcccgtccgggtgctcgtcgagaagtgctg
gaaagttttttacgccgggtaagcgaaatcgaagagattgcaacccaaaaagcaggggtt
aaacaagcctatgcgattaatgcagggcgtgaagttcgggttatcgtgagtgctcaaagt
gtcaatgatgatgaaacggtattgattgcacgagagattgctgatgagatttctcaaaaa
gtgcagtttccgggtgaaatcaaagtgagcgtgatacgtgaaagccgtgcggtagaatac
gcccgataa

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