Candidatus Sulfuricurvum sp. RIFRC-1: B649_04180
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Entry
B649_04180 CDS
T02537
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sulr
Candidatus Sulfuricurvum sp. RIFRC-1
Pathway
sulr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B649_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulr03019
]
B649_04180
Messenger RNA biogenesis [BR:
sulr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B649_04180
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH_2
dUTPase
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
AFV97150
LinkDB
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Position
820980..822548
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AA seq
522 aa
AA seq
DB search
MLNSLLVGGAVALISGLVGFLISKKITASHFDLYLEQAKAKSKAIENEAQMILERASLRS
REIEKEAQKHYDETYDQVKKDLSMREEKIERVEREFELLRHNEEEKIAHERSNVENRRLN
LERNERALEKLKEDYRQKSEQVKVIVEQRAGLSVQEAKTILLEQVREDARLDLARHMREL
DEQSKEQLKRKANYILAQATSRFAGEYAAERLISVIHLDDDELKGRIIGKEGRNIKALEM
VSGVDIIIDETPNAIIVSSFNLYRRAIAVKTIELLVQDGRIQPARIEEVYQKVCDEFDEE
MTREGEEIIFEMGLQGIHSELTKLIGRLKYRSSYGQNALAHTLEVAHLAGIMASEMGGDV
KLARRAGLLHDIGKTLTQENGGNHVDIGVELCRRYNEDPVVINAIYAHHGHEEIKSIECA
AVCAADTLSAARPGARREVLESFLRRVSEIEEIATQKAGVKQAYAINAGREVRVIVSAQS
VNDDETVLIAREIADEISQKVQFPGEIKVSVIRESRAVEYAR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacagcctactcgtagggggcgcagttgccctcatcagcgggttagtcggattt
ttaatttcaaaaaagattaccgcctcacattttgatctttatttagaacaagcgaaagca
aaatcgaaagcgattgaaaacgaagcacaaatgattttagaacgtgcttcactgcgatcg
cgtgagatcgaaaaagaggcacaaaaacattacgatgagacgtatgatcaggtcaaaaaa
gatctctcgatgcgtgaagaaaaaattgaacgcgttgagcgtgaatttgaactgcttcgt
cacaatgaagaagagaagatagcgcacgagcgatcgaatgttgaaaatcgacgtctcaat
ttagaacgtaatgaacgtgctttagagaaattaaaagaagactaccgccaaaaaagtgaa
caagttaaggtgatcgttgaacagcgtgccggattatcggtgcaggaagcaaaaacgatt
cttttagagcaggtgcgcgaagatgcccgtttggatttagcgcgacacatgcgtgaattg
gacgaacaatccaaggaacagcttaagcgtaaagccaactatattttggcgcaagcaacg
tctcgctttgcgggagagtatgcggctgaacggctgatcagtgttatccacctcgatgat
gacgagctcaaggggcgtattatcggaaaagaggggcgcaatattaaggcgctagagatg
gtgagcggagtcgatattatcatcgatgaaacgccgaacgcgattatcgtgagttcattt
aatctctatcgtcgtgcgattgcggtaaaaacgatcgaactgttggttcaagacggtcgg
attcagcctgcacgtatcgaagaggtataccaaaaagtatgcgatgaatttgatgaggaa
atgacccgtgaaggggaagagatcatttttgagatggggttacaaggtatccattcagag
ctcactaaactgatcggacggctcaaataccgctccagttatgggcaaaatgcattggca
cataccctcgaagtagctcatctggccggaattatggcatctgagatgggaggggatgtg
aaactcgcccgtcgtgccggattactacacgatatcggtaaaactctgactcaagaaaat
ggagggaatcatgtcgatatcggcgtggaactctgtcgacgttacaacgaggacccggtg
gtgatcaacgctatttatgctcatcacggtcatgaagagatcaaaagcatcgagtgcgcc
gcagtgtgcgccgcagataccctctctgccgcccgtccgggtgctcgtcgagaagtgctg
gaaagttttttacgccgggtaagcgaaatcgaagagattgcaacccaaaaagcaggggtt
aaacaagcctatgcgattaatgcagggcgtgaagttcgggttatcgtgagtgctcaaagt
gtcaatgatgatgaaacggtattgattgcacgagagattgctgatgagatttctcaaaaa
gtgcagtttccgggtgaaatcaaagtgagcgtgatacgtgaaagccgtgcggtagaatac
gcccgataa
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