Sulfurospirillum diekertiae SL2-1: Sdiek1_0442
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Entry
Sdiek1_0442 CDS
T04910
Name
(GenBank) Bifunctional DNA-directed RNA polymerase subunit beta-beta'
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sdiek1_0442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suls03021
]
Sdiek1_0442
03400 DNA repair and recombination proteins [BR:
suls03400
]
Sdiek1_0442
Enzymes [BR:
suls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sdiek1_0442
Transcription machinery [BR:
suls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sdiek1_0442
DNA repair and recombination proteins [BR:
suls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sdiek1_0442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ARU47619
UniProt:
A0A1Y0HHN0
LinkDB
All DBs
Position
409354..413511
Genome browser
AA seq
1385 aa
AA seq
DB search
MLNSLKSGNRLRVDFSKVPKKIDVPNLLQLQQKSYEQFLDVENFKEESGVEKVFKSIFPI
HDPQNRLTLEYAGSEVGKPRYTVRECMERGLTYSVSLKMNIRLILWDKDEKSGEKTGVKD
IKEQAIFIREIPLMTDRTSFVINGVERVVVNQLHRSPGVIFKEEESPTVANKLIYNAQII
PDRGSWLYFEYDAKDTLFVRINKRRKVPITILFRALGYSKQDILKLFYPVLNIMIRENKF
LIEFSADNFLGRVDFDLKDEHGNLLLAAGKRLARKKAEKFIEDGIKFIEYPVEILVNRFL
SSPIIDKESGEVLYDTLAQLDEGKLAKIIEQKCETIEIANDLASGVDDAIINSFIADNET
LKLLRQTESIEDENDLAAIRIYKVMRPGEPVTKEAAKTFVKDLFFNSERYDLTKVGRMKM
NHKLGLTVPEYVTIMTSEDIIKTAKYLIKVKNGQGHIDDRDHLGNRRIRAIGELLANELH
AGLIKMQKAIRDKFTALSGSVEELMPHDLINSKMITSAIAEFFSSGQLSQFMDQTNPLSE
ITHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSMYAKVND
LGFVEAPYRKVENATITDEIIYITATQEEGLVIAPASTKINENNEIVEDLIEVRVDGETV
LIEKEKVDLIDLSSMMIAGVAASLIPFLEHDDANRALMGSNMQRQAVPLVKSDAPIVGTG
VEKIAARDSWEAIKVKRAGMVEKVDNKNVYILGEDEGGAFIDHYALQKNLRTNQNTTFTQ
KVIVRKGDMVEAGGVIADGPSMDQGELAIGKNAMVAFMPWNGYNYEDAIVISERMIREDA
FTSVHIYEKEVEARELKDGVEEITKDIPNVKEEELAHLDDSGIVKVGTYVTPGMILVGKV
SPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYATPSLEGIVVDVKIFTKKGYDKDPRAVQ
AYEQEKEILDREHHDKLLMLDREEMLRINALLLKNPLQEDQEISKTSYKKGGFIKAEDLH
NVNRFSINSIVKAFSNEVQDDYKDLKMYFQNEKKKLKEEHDEKLNIIEKDDILPSGVVKL
VKVYVATKRKLKVGDKMAGRHGNKGIVSNIVREVDMPYLKNGEIVDIVLNPLGVPSRMNI
GQILEVHLGLVGKRLGDQIEEIFKEKQGDWIKALREKMISIADVAKLMDARNFIDKVNDE
QLLIFARDWSKGVKFATPIFEGVNVEEFEKLFEMAKIDTDGKTDLYDGMTGQKMHERVNV
GYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTL
REMLTVKSDDVEGRILAYKALTRGENVPQTGIPETFYVLTNELKSLALDVEIYDEVEEDE
TTRTN
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatagcctaaaatctggaaatcgcttacgagtcgatttttccaaagtcccaaaa
aaaattgatgtaccaaatctactccaacttcaacaaaagagttacgaacagtttttagat
gttgaaaatttcaaagaagagagtggcgtagagaaggtttttaaatctatttttcctatt
catgatccccaaaatagacttactttagaatatgctggatctgaggttggaaaacctaga
tatactgtccgcgaatgtatggagcgtggccttacttattctgttagcttaaaaatgaat
attcgtcttatcctctgggataaagatgaaaaatccggtgaaaagactggtgtaaaagat
attaaagaacaagcaatttttattcgtgaaattccattaatgaccgatagaacttcattt
gttatcaatggtgttgaaagagttgttgttaatcagcttcacagaagccctggtgttatc
tttaaagaagaagagagcccaacggttgctaataagcttatttataatgctcaaattatt
ccagatcgcggttcttggctctattttgaatacgatgctaaagataccctatttgttaga
attaataaacgcagaaaagttcctattacgattctatttcgtgcacttggatacagcaaa
caagatattttaaaacttttttaccctgtgctcaatattatgattcgtgaaaataaattc
ttaattgagttctcagcagataacttcttaggtcgtgttgatttcgatcttaaagatgaa
catggaaaccttcttttggctgcaggaaagcgtcttgcacgtaaaaaagctgaaaaattt
attgaagatggtattaagtttattgaatatcctgttgaaattttggttaatcgttttctc
tcttctccaattattgataaagagagtggcgaagtcctttatgatacattggcacaactt
gacgaaggtaaattggctaagattattgaacaaaaatgtgaaacgattgaaattgccaat
gatcttgcaagtggtgtcgatgatgctattattaactcgtttattgctgataacgaaaca
ctgaaattacttcgtcaaacagagagcattgaagatgaaaatgacttagcagcgattcgt
atttataaagtaatgagaccaggcgagcctgttaccaaagaagctgcaaagacatttgtc
aaagatcttttctttaactctgaaagatacgatttaaccaaagttggtcgtatgaaaatg
aatcataaacttggacttacagtaccagagtatgtgacgattatgacgagcgaagatatt
atcaaaacagcaaaatatcttattaaggtcaaaaatggtcaaggtcatatcgatgatcgt
gatcacttgggcaatagaagaattagagctatcggtgagttacttgcgaacgagcttcat
gcaggtttgatcaaaatgcaaaaagcgattcgtgataaattcacagcacttagcggtagt
gttgaagagttaatgcctcatgatttgattaactctaaaatgattacttctgcgattgca
gaatttttctcaagtggacaattgtcacaatttatggatcaaaccaatccgctcagtgaa
attacacataaaagaagattatcggctcttggtgagggtggtttagtaaaagagcgtgca
ggctttgaagtccgtgacgttcacccaacacactatggtcgtatttgtccagtagaaaca
ccagagggtcaaaatattggtttgatcaataccctttcaatgtatgcaaaagttaatgac
cttggttttgtggaagcaccttaccgtaaagttgagaatgcaaccattacagatgagatt
atttacatcacagcaacacaagaagagggtttagttattgcccctgccagtaccaagatt
aatgaaaacaacgagattgttgaagatttaattgaggttagagttgatggtgagactgta
ctaattgagaaagagaaagttgatttgatcgatctttcgtccatgatgatagccggtgtt
gcagcttcacttattccattcttggaacatgatgatgcgaaccgtgcattgatgggttca
aacatgcaacgtcaagccgtgcctttggtcaaatcagacgcacctattgtgggaacgggc
gttgaaaaaattgcagctcgagactcttgggaagcgattaaagtcaaacgtgcgggtatg
gttgaaaaagttgataataaaaatgtttatattttaggtgaagatgaaggtggcgcattt
attgaccattatgcgcttcaaaaaaatcttagaaccaaccaaaatacaactttcactcaa
aaagtcattgtaagaaaaggtgatatggttgaagcgggtggtgttatcgctgatggtcca
agtatggatcaaggtgaacttgctatcggtaaaaacgcaatggttgcttttatgccatgg
aatggttataactacgaagatgcgattgttatctctgagcgtatgattcgtgaagatgct
tttaccagcgttcatatctatgaaaaagaggttgaagcacgtgagcttaaagacggcgta
gaagagattactaaagacattccaaatgtcaaagaagaagaattagcccatcttgatgat
agtggtattgtaaaagttggtacctatgtcactcctggcatgattcttgttggtaaagta
tcaccaaaaggtgaagtaaaaccaacgcctgaagagcgacttttacgtgctatttttggt
gagaaagcaggacatgttgtcaacaaatcactttatgcaacgccatcattagagggtatt
gttgttgatgttaaaatctttacaaaaaaaggttatgacaaagatccacgtgctgtccaa
gcatatgagcaagaaaaagagattttagaccgtgagcatcatgataaactcttgatgtta
gatcgtgaagagatgttgcgtattaatgcattgcttttgaaaaacccactacaagaagat
caagagattagcaaaacaagctataaaaaaggtggctttattaaagcagaagatcttcat
aatgttaaccgtttttcaattaattcgattgtaaaagcattctcaaatgaagttcaagat
gactataaagatcttaaaatgtacttccaaaatgagaagaaaaagctcaaagaagaacat
gatgagaaactaaatatcattgaaaaagatgatattttaccaagcggggttgttaagctt
gttaaagtttatgtggcaaccaaacgtaagcttaaagtcggtgacaaaatggcgggacgt
cacggaaataaaggtatcgtttctaatatcgttcgtgaagtcgatatgccttaccttaaa
aatggtgaaattgtcgacatcgttttaaatccactgggcgttccaagtcgtatgaatatt
ggacaaattcttgaggttcatttaggtcttgttggtaaacgtttaggcgatcaaattgaa
gagatatttaaagagaaacaaggtgattggattaaagcacttcgtgaaaaaatgattagt
attgctgatgttgccaaactgatggatgctaggaattttattgataaagtaaatgatgaa
caattgttgatttttgctagagattggagcaagggtgttaaatttgcaactccaattttt
gaaggtgttaacgttgaagagtttgaaaaactctttgaaatggcaaaaattgataccgat
ggtaagactgacttatacgatggtatgacaggtcaaaagatgcacgaaagagtcaatgtg
ggttacatgtacatgttaaaacttcaccacttggttgacgaaaaagtgcatgcaagaagt
acaggaccatactcactggttacgcaacaacctgttggtggtaaagccctctttggtggt
caaagattcggtgaaatggaggtatgggcgcttgaagcatacggtgctgctcatacacta
agagagatgttaacagtcaaatcagacgacgttgaaggacgtattttagcttataaagca
cttactagaggtgaaaatgtccctcaaacaggaattcctgaaacattctatgttttaacg
aatgagttgaagtctttggctttagatgttgagatttatgacgaggtggaagaagatgaa
acgactagaaccaattga
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