Sulfurospirillum diekertiae SL2-1: Sdiek1_2061
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Entry
Sdiek1_2061 CDS
T04910
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sdiek1_2061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suls03400
]
Sdiek1_2061
Enzymes [BR:
suls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sdiek1_2061
DNA repair and recombination proteins [BR:
suls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sdiek1_2061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PriA_C
PriA_3primeBD
PriA_CRR
nSTAND3
AAA_22
AAA_19
PolC_DP2
SLFN-g3_helicase
PhoH
AAA_30
DUF6166
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ARU49220
UniProt:
A0A1Y0HMQ2
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All DBs
Position
complement(1988613..1990448)
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AA seq
611 aa
AA seq
DB search
MFYYHIALLKSPLSPLTYQSEQSLPLGAVVEVILSKRTTHGVVVDEVEKPSFECEAISFT
CKTFYLSKTLELARFIAEYYVCSLGEALSLFVPYTHNALHVNEKIAIDITLSTEQQKAYD
FIEAHPMSLLFGDTGSGKTEIYMKLFEQTINEGKQAIFLLPEIGLTPQMKNRLKHHFGTH
VAIWHSKISAKKKEQILSDLAEGKISIIAGTRSALFLPLEHLGLIVVDEEHDESYKSGNR
PRYNAKDLALLFGQKLGCKVLLGSATPTLTSFHKIPTFRLKGTFFESQSYIMYDDGEHGL
SFRMTQAIQKALDAHKQVIVFLPTRANFKYITCKNCGANVECPFCSVGMSLHHNMNALKC
HYCNYTEVIPKVCPKCGCEEIVATRMGTAEVSQKLSEHFSEHVVQQFDRDEVRTEKKLSE
ILSDFNEHKIDIMVGTQMLSKGHDYHGVGLAVILGVDALLGMNDFRSREKTLALVLQIAG
RAGRKGYGEVLIQSKNGDFFKQYLGDFEQFLKDELMFRKGLYPPFKKMLRLMSSHVKDEK
AKALIDQVALIAQSFPQVEVVGFGKANISKIANKYRYELLARSDSSKALLEFAHAVKLLH
VEADIDPLSFS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgttttactaccatattgctcttttaaaatccccgctttcgcctttaacctatcagtcg
gagcagtcgcttcctttaggggctgtcgttgaagtcatactttccaaacgaactacgcac
ggtgtggtggttgatgaggttgaaaaaccttcttttgagtgtgaagctatttcttttaca
tgtaaaaccttttacctttccaaaacacttgaactcgctcgttttatcgccgagtattat
gtctgttcactcggtgaagcactaagcctttttgtaccgtatactcacaatgctttacat
gtaaacgaaaaaattgcgatagatataacactttccactgaacaacaaaaagcatatgat
tttattgaagcgcatcctatgtcactgctttttggcgatacgggaagtggtaaaaccgaa
atctatatgaaactctttgaacagaccatcaatgagggcaaacaagccatctttttgctt
ccagaaatcgggttgacacctcagatgaaaaaccgtttgaagcatcattttggaacgcac
gttgccatttggcattccaaaatcagcgcaaagaaaaaagagcagatactgagcgaccta
gcagagggcaaaatttccatcattgcaggtacacgttcagcgcttttcttgccattagaa
cacttagggttgattgttgtggatgaagagcatgatgaaagctacaagtcaggcaatcgt
cctcgctacaatgcaaaagatttggcacttctttttggacaaaagctgggctgtaaagtg
cttttaggctctgcgactccgacattaacgagctttcataagattccaacttttagactt
aagggcactttttttgagtctcaaagttacatcatgtacgatgatggtgagcatggactt
agttttaggatgacgcaagcgattcaaaaagcgctcgatgcacacaagcaagtcatcgtc
tttttaccgacacgcgcgaactttaagtacattacatgtaaaaactgtggcgcgaatgtc
gagtgtccgttttgcagtgtgggaatgagtcttcaccataatatgaacgcgctcaaatgt
cactactgcaactacaccgaagtcattcctaaagtttgtccgaaatgtgggtgtgaagag
attgtcgcaacacgcatgggaacggcggaagtgagtcaaaagcttagcgagcatttttct
gagcatgttgtgcaacagtttgaccgtgatgaagtacgaacagaaaaaaaactttctgag
attttaagtgattttaacgagcataaaatcgacattatggtgggaactcagatgctctca
aaagggcatgattaccacggtgtgggacttgccgtcattcttggggttgatgcacttttg
ggtatgaatgattttagatcacgtgaaaaaacacttgccttagtgttacaaatcgcaggt
cgagctgggcgaaaagggtacggtgaagtgctgatacaaagtaaaaacggtgattttttc
aagcagtatttgggtgattttgagcagtttttaaaggatgaattgatgtttcgaaaagga
ctttatccaccttttaaaaagatgctcagactcatgagttctcatgtcaaagatgaaaaa
gccaaagcgttgatcgaccaagtcgctctcatcgcacaaagcttcccgcaggtcgaagtg
gtgggctttggcaaagcgaacatctccaaaatcgcgaataaataccgctatgaactctta
gcccgcagtgattctagcaaagcgttactggaatttgcacatgctgtgaaactcttacat
gttgaagcggatatcgatccgttatctttttcttaa
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