Sceloporus undulatus (fence lizard): 121916330
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Entry
121916330 CDS
T07740
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04510
Focal adhesion
sund04512
ECM-receptor interaction
sund04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121916330 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121916330 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121916330 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sund00535
]
121916330 (COL9A2)
Proteoglycans [BR:
sund00535
]
Extracellular matrix (ECM) proteoglycans
Others
121916330 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
121916330
NCBI-ProteinID:
XP_042297228
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Position
9:complement(11961869..11993686)
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AA seq
690 aa
AA seq
DB search
MASFWDNLKFCLLLQTVCFSLAQFQGPPGEPGPRGPPGPPGIPGADGIDGDKGPPGAAGS
PGTKGEPGLPGSDGPPGKPGIDGLTGAKGEPGPAGRPGPKGQPGLVGPPGLPGPSLPGPP
GTAGQVGLPGEIGALGPKGFRGPDGPRGPPGPPGKPGPVGRIQGVEGSADFLCPTNCPPG
PKGPQGLQGLKGHRGRPGVLGEPGRQGRPGPKGDIGLSGEQGIPGPPGPQGLRGYPGMEG
PKGETGPRGYKGMIGTIGAAGPPGEEGPRGPPGQAGEKGDLGARGFRGPQGDIGPKGANG
LPGIDGKDGTPGIPGVKGNAGQPGLPGPQGHRGLAGLPGTPGTKGGPGDKGEPGGRGLRG
SSGAPGKMGEPGPSGEVGPQGVAGVKGDRGERGPVGPPGLQGRVGPKGEQGPPGIPGPQG
LPGVKGDKGFPGKIGSKGDIGDPGVEGLPGEKGEKGESGEPGPKGQPGVRGEPGFPGPTG
DAGAPGVRGFPGPPGPRGLGGERGVPGMPGPQGAPGRDTGDQHIVDVVLKMLQEQLAELA
VSAKRAALGGAGVMGPPGPPGPPGPPGQQGPHGHTGSRGIPGIIGAPGQIGNTGPKGKRG
EKGEQGEPGRGHQGMPGPPGIPGLPGRPGHAINGKEGERGFPGNPGEAGRPGLPGPSGLP
GFCEAAACLGASAYASARMTEPGAVKGPSY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctagcttttgggataatctcaaattctgccttctcctccaaaccgtctgcttctcc
ctggctcagtttcaaggtccaccaggggaacctgggccgagaggccccccaggtcctcca
ggcattccaggagcggatggcattgatggtgataaaggcccgccaggagcagcagggagc
cctgggaccaaaggagaaccgggtctcccaggttcagatggcccaccagggaagcctggg
attgatggtctaacaggggcaaaaggagaaccaggtcctgctgggagaccaggccctaaa
ggccagcctggacttgttgggccaccaggactcccagggccttccttgccaggacctcct
ggtactgcaggccaagttggacttccaggagaaattggggctctgggacccaagggcttc
cgtggacctgatggaccacgaggtcctccaggacctcctgggaagccgggccctgttggt
cgcatccaaggagttgaaggcagtgcagatttcctgtgcccaacgaattgcccacctgga
cccaaaggacctcaggggttacagggcttaaagggacacagaggccgccctggagtcctg
ggggaacctggaagacaaggccggccgggcccgaagggtgacatcggcctctctggagaa
caaggcattcctggccctcccggtccccaaggtctgaggggatatccaggaatggaaggg
cccaaaggagaaacgggtccccgtggctataaaggcatgataggaaccattggcgctgca
gggcctccgggcgaagaaggtcccaggggaccacctgggcaggctggcgagaagggagac
cttggtgcccgtggtttcagggggcctcaaggagatattgggcccaaaggagcaaatggt
cttccgggcattgatggtaaagatggtacccctggcattccaggagtaaaggggaatgca
gggcaaccaggactaccgggtccccaagggcaccgtggattagcgggcttgccaggcacc
cctggaaccaaaggtggccccggagacaagggtgaacccggaggacgtgggctgcgaggt
tcatcgggggcacctgggaaaatgggtgaacctggaccttctggagaagtgggacctcag
ggggttgctggcgtgaagggagatcggggtgagaggggcccagtgggtcctccaggactg
caagggagagtgggcccgaaaggggaacaaggaccgccaggaattccaggtccgcaaggt
ctcccaggagttaaaggtgacaagggcttcccaggaaaaatcggatccaaaggtgacatt
ggagatcctggagttgaaggccttcctggagagaaaggggagaaaggtgaatcaggggag
cctggaccgaaaggacagccaggtgtccgtggagaacctggtttccctggaccgactggg
gacgcaggggcgcctggtgtcagaggcttcccagggccacctggccctcgaggactcggt
ggggagagaggcgtacctggcatgcctggacctcaaggggctccggggagggacacagga
gaccagcacattgtggatgtggtcttgaaaatgttgcaagagcaactggctgagttagcc
gtgagtgccaaaagagctgccttaggtggggcaggtgtgatgggaccacctggaccacca
ggaccacctgggcctcctggtcaacaagggccacatggacacacgggctctcgtggcatc
ccagggatcatcggagctccaggacagattggcaatactggacccaaaggaaagaggggt
gagaaaggagagcagggagaaccaggccgtggacatcaagggatgccagggccaccaggt
ataccaggtcttcctggtcgtcctggccatgccatcaatggcaaggaaggagaacgaggt
ttcccaggtaatccaggagaagctgggcggcctggtttacctgggccctctggtcttcct
gggttctgcgaagcggccgcctgcctaggagcttctgcctatgcttcagctcggatgacc
gaaccaggtgctgtcaagggaccatcgtactaa
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