Streptococcus suis SS12 (serotype 1/2): SSU12_1321
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Entry
SSU12_1321 CDS
T02025
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
suo
Streptococcus suis SS12 (serotype 1/2)
Pathway
suo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
suo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SSU12_1321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suo03021
]
SSU12_1321
Transcription machinery [BR:
suo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SSU12_1321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DUF2316
DprA_WH
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
AER15500
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All DBs
Position
complement(1348323..1349441)
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AA seq
372 aa
AA seq
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MTNKKDKKTEVTTFDVQVAEFIRNHKKQGSATDDEINDQLVIPFTLDADGIDDLLQRIQD
AGISIVDKEGNPSARAMQVEEEPELSDEELLGSTSAKVNDPVRMYLKEIGVVPLLTNEEE
QELALAVEAGDPEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDY
SKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPE
QIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLR
EQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHP
SRSKPLRDFIED
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaaaaagataaaaaaacagaagtaactacttttgatgtacaagttgccgaa
tttatccgtaaccataaaaaacaaggttcagctacagacgatgaaatcaatgaccaactg
gttattccatttacgcttgatgctgacggaatcgatgatttgctccaacgtattcaggac
gcagggatttcgattgttgataaagaagggaacccttctgctcgtgctatgcaggtagag
gaagaaccagaattatctgatgaagaattgctcggaagcacttctgcaaaagtgaacgac
ccagtccgcatgtatttgaaagaaattggtgttgtacctcttttgaccaacgaggaagag
caagaattggcattggcggttgaggcaggtgacccagaagcgaaacaacgtttggctgaa
gccaacttgcgtttggttgtatccattgctaaacgctatgtcggccgtggtatgcagttc
cttgatcttatccaagaaggaaacatgggcttgatgaaggctgttgataagttcgactac
tctaaaggtttcaagttttcaacctatgcaacctggtggattcgtcaggctatcactcgt
gccattgcggaccaagcgcgtacaatccgtatccctgttcacatggtagaaaccattaac
aaattggtccgtgaacaacgcaatctcttgcaggaattgggccaagatccaactccagag
caaatcgctgagcgtatggatatgacgcctgagaaagttcgtgaaatcctcaagattgcc
caagagcctgtttcactcgagaccccaattggtgaagaagatgatagtcatcttggagat
tttatcgaagacgaagtcattgaaaatccagttgattacacaactcgtgtcgttcttcgt
gaacagttagatgaggtattggatactcttactgaccgtgaggaaaacgtattgcgtctt
cgttttggtttagatgatggtaaaatgcgtacgcttgaagatgttggtaaagtctttaac
gtaacccgtgaacgcatccgccaaatcgaagccaaagccctccgtaaactccgccaccca
tcccgcagcaaaccactaagagattttattgaggattga
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