Stigmatella aurantiaca: STAUR_5012 Help Entry STAUR_5012        CDS       T01425                                  Name (GenBank) RNA polymerase Rpb1   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism sur  Stigmatella aurantiaca Pathway sur03020   RNA polymerase Brite KEGG Orthology (KO) [BR:sur00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     STAUR_5012  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sur03021]     STAUR_5012    03400 DNA repair and recombination proteins [BR:sur03400]     STAUR_5012 Enzymes [BR:sur01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      STAUR_5012 Transcription machinery [BR:sur03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      STAUR_5012 DNA repair and recombination proteins [BR:sur03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       STAUR_5012 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid ApbA_C Motif Other DBs NCBI-ProteinID:  ADO72790 UniProt:  E3FGT1 LinkDB All DBs Position complement(6187269..6191486) Genome browser AA seq 1405 aa AA seqDB search MKDIFNFFEKPKDPLSFNAIRIALASPDKIRQWSHGEVKKPETINYRTFKPERDGLFCAR IFGPVKDYECNCGKYKRMKHRGVVCEKCGVEVIQSKVRRERLGHITLATPVAHIWFLKSL PSRIGNLLDITLKDLEKVLYCESYIVLDPKATPLLKGELLSEEKMHRLFQEHGEDSFTAG MGGEAVREMMKSIDIEKLSEDLRRDMRETNSEAKRKKYAKRLKVAEAFRVSGNRPEWMML DVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLQELNAPDIIIRNEKRML QEAVDALFDNGRRGKTITGPNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP ELKLHQCGLPKIMALELFKPFIYNKLEEKGYVTTIKSAKKMVEKERPEVWDILEDVIREH PVLLNRAPTLHRLGMQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQME ARVLMMSTNNILSPAHGKPIIVPTQDMVLGIYYMTRAREFAHGEGRVFASPEEVRAAYDH GEVHLQAKVVCRINGKRKETTVGRVLLWDIVPRKVGFDAINKVLDKKSLGSLIDLCYRLT GEKETVLLADRIRSLGYTNATRAGISIALKDMVIPAKKQEFLDYANKEVAEIENQYLEGL ITDGERYNKVIDIWAEITEKVASEMMQQISQEEASGEGKEGKRETRKQPSFNPIYIMADS GARGSAQQIRQLAGMRGLMAKPSGEIIETPITANFREGLSVLQYFISTHGARKGLADTAL KTANSGYLTRRLVDVAQDAIINEYDCGTMDGLFIGSLVEGGEIIEPLGERILGRVALDDI LDPVTGEVLVRANEEIDEDRVRRIENSGLDKVKIRSVLTCQAKRGICVECYGRDLARGRK VSIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTATRRAEQSSLENRYSGTVKFAGLITVQK TDGTLVAMNRNGELVVVDDSGRERERYQVIYGARILVKEGQRLEAGTLLAEWDPFAIPLL TEVGGVVRYEDIIEGVTMSEALDEVTGLSRKTVIESKDPEARPRITIRDANGNVKELPSS RNPASYFLPQGSIITVNDGDEIHPGEVIAKVPRETTKTKDITGGLPRVAELFEARKPKDA AAIAEIDGVVSFGKDTKGKRKLIITPEVNNEARTDLAKEYLISKGKNISVHSGDRVKAGE ALMDGSANPHDILKVLGEKELARYLVDEVQEVYRLQGVKINDKHIETIVRQMLRRVRVTE VGDTNFLVDEQVEKWVFEEENEKVMSEGKRPAVGEPLLLGITKASLSTESFISASSFQET TKVLTEAAINGKVDYLRGLKENVIMGRLIPAGTGLPNYRHLDIEVESPTDEVNEMEAALA ATHGDSSSMQSLSSRSEGTQTSGAA NT seq 4218 nt NT seq  +upstreamnt  +downstreamnt gtgaaggacattttcaacttcttcgagaagccgaaggacccgctgtcgtttaacgccatt cgcatcgcgctggcgtcgccggacaagatccggcagtggtctcacggcgaggtgaagaag ccggagaccatcaactaccgcaccttcaagccggagcgggacggtctcttctgcgcccgc atcttcgggccggtgaaggactacgagtgcaactgcggcaagtacaagcgcatgaagcac cgcggcgtggtgtgtgagaagtgcggcgtggaggtcatccagtccaaggtgcgccgtgag cgcctgggccacatcaccttggccacgcccgtggcccacatctggttcctcaagtcgctg ccgagccgcatcggcaacctgctcgacatcaccctgaaggatctggagaaggtgctctat tgcgagagctacatcgtcctggatcccaaggcgacgccgctgctcaagggtgagctgctc tccgaggagaagatgcaccggctcttccaggagcacggtgaggactccttcaccgccggc atgggcggcgaggccgtccgcgagatgatgaagtccatcgacatcgagaagctgtcggag gacctccgccgcgacatgcgggagaccaacagcgaggccaagcggaagaagtacgccaag cgcctgaaggtggccgaggccttccgcgtctcgggcaaccgccccgagtggatgatgctg gacgtcatccccgtcatcccgcccgacctgcgtccgctcgtccccctggacggtggccgc ttcgcgacgtccgacctcaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctc aagcggctccaggagctgaacgcgccggacatcatcatccgcaacgagaagcggatgctg caggaggccgtggacgcgctgttcgacaacggccgccgtggcaagaccatcaccggcccg aacaagcggccgctgaagtcgctgtccgacatgctcaagggcaagcagggccggttccgc cagaacctgctcggcaagcgcgtggactactcgggccgctccgtcatcgtcgtgggcccg gagctcaagctccaccagtgcggcctgccgaagatcatggcgctcgagctcttcaagccg ttcatctacaacaagctcgaagagaagggctacgtcaccaccatcaagagcgccaagaag atggtggagaaggagcgtcccgaggtgtgggacatcctcgaggacgtgatccgcgagcac ccggtgctcctcaaccgcgcccccacgctgcaccgcctcggcatgcaggccttcgagccg gtcctcatcgagggcaaggccatccagctgcacccgctggtgtgcgccgccttcaacgcg gacttcgacggcgaccagatggccgtgcacgtgccgctctccatcgaggctcagatggag gcgcgcgtgctgatgatgtccaccaacaacatcctcagccccgcacacggcaagcccatc atcgtccccacgcaggacatggtgctcggcatctactacatgacgcgcgcccgtgagttt gcccacggcgagggccgcgtgttcgcctcgcccgaggaagtgcgcgccgcgtacgatcac ggcgaggtgcacctccaggcgaaggtcgtctgccgcatcaacggcaagcgcaaggagacc acggtgggccgcgtcctgctgtgggacatcgtcccgcgcaaggtcggcttcgacgccatc aacaaggtgctcgacaagaagtcgctcggctcgctcatcgacctctgctaccgcctcacc ggcgagaaggagacggtgctcttggccgaccgcatccgcagcctcggctacaccaacgcg acccgcgccggcatctccatcgcgctcaaggacatggtcattcctgccaagaagcaggag ttcctggactacgcgaacaaggaagtggcggagatcgagaaccagtacctcgagggcctc atcaccgacggtgagcgctacaacaaggtcatcgatatctgggcggagatcaccgagaag gtcgccagcgagatgatgcagcagatctcgcaagaggaagcctcgggagagggcaaggag ggcaagcgcgagacgcgcaagcagccgtccttcaaccccatctacatcatggccgactcc ggtgcccgtggctctgcccagcagatccgccagctggccggtatgcgtggcctcatggcc aagccctcgggtgaaatcatcgagacgcccatcacggcgaacttccgtgaaggcctctcg gtgctccagtacttcatctccacccacggtgcccgcaagggtctggccgacacggcgctc aagaccgccaactccggttacctcacccgccgtctcgtggacgtggcgcaggacgccatc atcaacgagtacgactgcggcaccatggacggtctgttcatcggttccctggtcgagggc ggcgagatcatcgagccgctcggcgagcgcatcctgggccgcgtggccttggacgacatc ctcgatcccgtcacgggcgaggtgctggtgcgcgccaacgaggagatcgacgaggaccgc gtccgccgcatcgagaacagcggtctggacaaggtgaagatccgctcggtgctcacctgc caggccaagcgcggcatctgcgtggagtgctacggccgtgacctggcccgtggccgcaag gtgtccatcggcgaggccgtgggcgtcatcgcggcgcagtccatcggcgagccgggtacc cagctcacgatgcgcacgttccacatcggtggtacggcgacgcggcgcgcggagcagtcc agcctcgagaaccgctacagcggcacggtgaagttcgcgggcctcatcacggtgcagaag acggacggcaccctggtggccatgaaccgcaacggcgagctcgtcgtggtggacgacagc ggccgcgagcgcgagcgctaccaggtcatctacggcgcccgtatcctcgtgaaggagggc cagcgcctcgaggctggcacgctcctggccgagtgggatccgttcgcgattccgctgctc accgaggtgggcggtgtcgtgcgctacgaggacatcatcgaaggcgtcacgatgagcgag gccctcgacgaggtgaccggcctcagccgcaagacggtcatcgagtcgaaggatcccgag gcccgtccgcgcatcaccatccgtgatgcgaacggcaacgtgaaggagctgcccagctcc cgcaacccggcgagctacttcctgccccagggctcgatcatcaccgtcaacgatggtgac gagatccacccgggcgaagtcatcgccaaggtgccgcgcgagacgacgaagaccaaggac atcacgggcggtctgccccgcgtggccgagctcttcgaggcgcgcaagccgaaggacgcg gcggcgatcgcggagatcgacggcgtggtgtcgttcggcaaggacaccaagggcaagcgc aagctcatcatcacccccgaggtgaacaacgaggcgcgcacggacctggccaaggagtac ctgatctccaagggcaagaacatcagcgtgcactcgggggaccgcgtgaaggcgggcgag gccctgatggacggctccgccaacccgcacgacatcctcaaggtgctcggcgagaaggaa ctggcgcgctacctggtggacgaggtgcaggaggtctaccgcctccagggcgtgaagatt aacgacaagcacatcgagacgatcgtccggcagatgctgcgccgggtgcgcgtcaccgag gtgggcgacaccaacttcctggtcgacgagcaggtcgagaagtgggtgttcgaggaggag aacgagaaggtcatgtccgagggcaagcgccccgcggtgggcgagccgttgctgctcggc atcaccaaggcctcgctctccaccgagtcgttcatctcggcgtcctccttccaggagacc accaaggtgctcaccgaggccgccatcaacggcaaggtcgactacctgcgtggcctcaag gagaacgtcatcatgggccgcctcatccccgcgggcacgggtctgccgaactaccgccac ctcgacatcgaagtggagagcccgaccgacgaggtcaacgagatggaggccgccctggcc gccacccacggagactcgtcctcgatgcagtccctctcgtcgcgctccgaggggacgcag acctcaggcgctgcctag

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