Strix uralensis (Ural owl): 141951533
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Entry
141951533 CDS
T11361
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
sura Strix uralensis (Ural owl)
Pathway
sura03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141951533 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sura03041
]
141951533 (PRPF6)
Spliceosome [BR:
sura03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141951533 (PRPF6)
Complex C
U5 SnRNP specific factors
141951533 (PRPF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
FAT
TPR_CcmH_CycH
TPR_1
ARM_TT21_N
ARM_TT21_C
ARM_TT21_5th
TPR_21
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
141951533
NCBI-ProteinID:
XP_074744029
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All DBs
Position
18:2028686..2054647
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AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQSGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE
QKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CENAEPRHGELWCDVSKDIENWQKKIGEILMLVAAKLKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcctgggcatgcccgcgcctctgggctacgtgccgggg
ctgggccgcggggccacaggtttcaccacccgctctgatatcggccctgcacgtgatgcc
aatgaccccgtggatgatcgtcatgctccgccggggaagagaactgttggggatcaaatg
aaaaagaaccagacggcggatgatgatgatgaagatttgaacgacaccaattacgatgag
ttcaatggatacgctgggagcctgttctcaagtggtccctatgaaaaggatgacgaggaa
gcagatgctatttatgcagctttggataagaggatggatgaacgcagaaaagaaagaagg
gaacaacgagagaaagaagaaatagaaaaataccgtatggaacgacccaaaattcagcag
cagttctcagacttgaaacggaagctggcagaggtcacggaagaagagtggctcagtatt
ccagaagttggcgatgccaggaacaagcgtcagagaaatcctcgttatgagaagctgact
cctgtacccgacagcttctttgcaaagcatttacagtcgggggagaatcacacctctgtg
gacccgcgccagacgcaatttggtggattgaatacaccatatccaggaggcttgaatact
ccgtacccaggaggaatgacaccaggcttaatgacaccagggacaggtgaattggatatg
agaaagattggccaagccaggaacaccttgatggatatgaggctaagccaggtgtccgac
tctgtgagtggccagactgtagtggacccgaaaggatatttgacagacttgaattcgatg
attcccacacatggaggagatatcaatgatatcaagaaagcccgtttgctcctgaaatct
gtacgagagaccaatcctcatcatccgccagcctggatagcatcagcccgactggaggag
gtcactggcaaactccaggtggctcgaaacctcatcatgaagggaacggagatgtgcccc
aagagtgaagatgtttggttagaagctgctcggcttcagcctggggatacagccaaggct
gttgtggcccaagctgtccgccaccttccacagtctgtccgaatctacatcagagcagca
gagctggagacggatatccgtgcgaagaaacgcgtccttaggaaagcccttgagcatgtt
ccaaattcagtgcgtttgtggaaggcagctgtggagttagaagaacctgaggatgccagg
atcatgctgagtcgggctgtggagtgctgtccgacgagcgttgaactgtggcttgcgctg
gcgaggctggagacatatgagaatgctcgtaaagtccttaacaaagcccgtgagaatatt
ccgacggatcgtcacatctggattactgctgccaaactggaggaagccaatggaaacacc
cagatggtggagaaaatcattgacagagccatcacgtctctgagggctaacggtgtggaa
atcaacagggagcagtggatacaggatgctgaggaatgtgataaagctggaagtgtggcc
acatgccaggcaatcatgcgagctgtgattgggattgggattgaggaagaagatcggaaa
catacctggatggaagacgcagacagttgtgttgctcataatgctctggagtgtgcccga
gcaatttatgcttacgccttgcaagttttccccagcaagaagagcgtgtggctgcgagct
gcctactttgaaaagaaccatggaacgagagaatccttggaggctcttctgcagagagct
gtggctcactgccccaaagcagaagtgctttggctcatgggagccaaatcgaagtggctg
gcgggagatgtgccagcagccagaagcattttggccctggctttccaggccaaccccaac
agcgaggagatctggctggctgccgtgaagctcgagtcagaaaacaatgaatatgaaaga
gcgaggaggctgctggcaaaagctcgcagcagtgcccccactgcaagggtcttcatgaag
tctgtgaagttagaatgggtgcttgggaacattgctgcagcccaggagctttgtgaggaa
gccctgaagcactatgaggacttccccaaactgtggatgatgaagggacaaatcgaggaa
caaaaggagctggtagagaaagcgcgggaggcttataatcaagggttgaaaaagtgcccc
cattccatacctctgtggcttctgctgtccaggctggaggagaaagtggggcagttgact
agagcaagagccatcttggaaaagtctcgcctaaagaatccaaagaatccagatctctgg
ttggagtctgtgcggttagagtacagagctgggctaaagaatattgcaaatactctgatg
gccaaggcattgcaagaatgtcccaattcaggaatcctgtggtcagaggcgattttcctt
gaagcgcgaccgcaacgaaagaccaagagcgtggatgctctcaagaagtgtgaacatgac
ccacacgtcctgctggccgtggccaagctgttctggagcgagcgtaaaataaccaaggcc
agagaatggttccaccgaacggtgaagatagactccgacctgggcgatgcctgggctttc
ttttacaaatttgagctccagcatggcacggaggaacaacaagaagaggtgaggaagcgc
tgtgagaatgctgaacctcgccacggagagctctggtgtgatgtctccaaggacatagag
aattggcagaaaaagatcggcgagattctcatgcttgtggcagccaagcttaaaaatacc
ttctag
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