Serratia ureilytica: J0X03_18025
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Entry
J0X03_18025 CDS
T07185
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
suri
Serratia ureilytica
Pathway
suri00550
Peptidoglycan biosynthesis
suri01100
Metabolic pathways
suri01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J0X03_18025 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J0X03_18025 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
suri01011
]
J0X03_18025 (mrdA)
Enzymes [BR:
suri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J0X03_18025 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
suri01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
J0X03_18025 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QSR06305
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Position
3816389..3818284
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AA seq
631 aa
AA seq
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MKIERNPFRDYTAESALFVRRALVAFLVILVLSGILIANLYNLQVVRVEDYRTRSNENRI
KLVPIAPSRGIIYDRNGTPLALNRTIYQLELMPEKVDDLKATLQALRPVVDLTDDDITNF
EKERKRSRRFVSIPVKTALTEVQVARFAVNQFRFPGVEVKGYQRRYYPYGSALTHVTGYV
SKINDRDVERLDKDGKLANYAATHDIGKLGIERYYEDTLHGKTGYEEVEVNNRGRVIRQL
HEQPPSAGQDVYLTLDLNLQRYIEQLLVGSRAAVVVSDPRTGAILAMVSNPSYDPNLFVD
GISSKDYQGLLNDPNRPLINRATQGVYPPASTVKPYIAVSALSAGVITKNTVVFDPGWWQ
LPGSEKRFRDWKKWGHGRLNVTKALEESADTYFYQVAYDMGIDRLSTWLTKFGYGQYTGI
DLSEERSGLMPTREWKQKRYKKPWYQGDTIPVGIGQGYWTATPIQMAKALNTLINDGTVK
TPHLLQSTRINGALVPFKQEENTQIGDIHSGFWEIAKDGMYGVANRPNGTARKYFADAPY
KAAAKSGTAQVFGYETYNAHKLAEHLRDHKLMTAFAPFNNPTVSVAIILENGGSGPAVGT
ITRQILDHILLGDNNTQLPSEAPLPPGVEGD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaacgtaacccttttcgcgactatacggctgaatccgccctgtttgtacgc
cgcgccctggtggcgttcttggtcatcctggtgctgtccggcatcctgatcgccaacctg
tataatctgcaagtggtccgcgtcgaggattaccgcacccgctccaacgaaaaccgcatc
aagctggtgcccatcgcgcccagccgcggcattatctacgatcgcaacggcactccgctg
gcgctcaaccgcaccatttatcagctggaactgatgccggaaaaggtcgacgatctcaaa
gccacgctgcaggcgctgcgcccggtggtcgacttgaccgatgacgacatcaccaatttc
gaaaaagagcgcaagcgctcgcgccgtttcgtctccattccggtgaaaaccgcgctgacc
gaggtgcaagtcgcccgttttgcggtcaatcagttccgcttcccgggtgtggaagtgaaa
ggctaccagcgccgctactacccctacggctccgccctcacccacgtcaccggctacgtg
tccaagatcaacgatcgcgacgtcgagcgactggacaaagacggcaaactggccaactac
gccgccacccacgatatcggcaagctgggcatcgaacgctattacgaagacacgctgcac
ggcaaaaccggctatgaagaggtcgaggtcaacaaccgcggccgggtgatccgccaattg
cacgaacagccgccttccgccggtcaggacgtctacctgacgctcgatcttaacctgcag
cgctatatcgaacagctgttggtcggcagccgcgccgcggtggtggtgagcgatccgcgc
accggcgccatcctggcgatggtctccaacccgagctacgatccgaacctgttcgtcgac
ggcatttccagcaaggactatcaggggttgctgaacgatccgaatcgcccgctgatcaac
cgcgccacccagggggtctacccgcccgcctcgacggtgaagccttatatcgcggtgtcg
gcgctgagcgccggggtgatcaccaaaaacaccgtggtgttcgatcccggctggtggcaa
ttgcccggctcggaaaaacgctttcgcgactggaagaaatggggccacggccgcctgaac
gtcaccaaggcgctggaagagtccgcagatacctatttctaccaggtcgcttatgacatg
gggatcgatcggctgtcgacctggctgaccaaattcggttacggccagtacaccggcatc
gatctgtccgaagagcgctccggcctgatgccgacgcgcgaatggaagcagaaacgctat
aaaaaaccgtggtatcagggcgacaccattccggtaggcatcggccagggttactggacc
gcgacgccgatccagatggccaaggcgctgaacaccctgatcaacgacggcaccgtcaaa
acgccgcacctgctgcagagcacccgcatcaacggcgcgctggtgccgttcaaacaggaa
gaaaacacgcagatcggcgatattcactccggcttctgggaaattgccaaagacggcatg
tacggtgtggccaaccgtccgaacgggacggcgcgcaaatactttgcggacgcaccttat
aaagccgcggcgaaatcgggtaccgcacaggtattcggctatgaaacctacaacgcccac
aaactggcggagcacctgcgcgatcacaaactgatgaccgccttcgcaccgttcaacaac
ccgacggtgtcggtcgccatcattctggaaaacggcggctccggtccggcggtggggacc
atcacccgccagatcctcgaccacattctgctgggcgacaacaatacgcaattgccaagc
gaggccccgctgccgcctggcgtagaaggtgactaa
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