Sutterella megalosphaeroides: SUTMEG_02830
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Entry
SUTMEG_02830 CDS
T05697
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sutt
Sutterella megalosphaeroides
Pathway
sutt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sutt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SUTMEG_02830 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sutt03021
]
SUTMEG_02830 (rpoC)
03400 DNA repair and recombination proteins [BR:
sutt03400
]
SUTMEG_02830 (rpoC)
Enzymes [BR:
sutt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SUTMEG_02830 (rpoC)
Transcription machinery [BR:
sutt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SUTMEG_02830 (rpoC)
DNA repair and recombination proteins [BR:
sutt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SUTMEG_02830 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
HTH_13
Motif
Other DBs
NCBI-ProteinID:
BBF22392
UniProt:
A0A2Z6I7W1
LinkDB
All DBs
Position
314609..319027
Genome browser
AA seq
1472 aa
AA seq
DB search
MKTALNDIFNQVQKDEHFDAIRIGLASPEKIHSWSYGEVKKPETINYRTQKPERDGLFCA
KIFGPTKDYECICGKYKRLKNRGVICEKCGVEVTLAKVRRERMGHIDLASPVAHIWFLKS
LPSRMGMVLDIPLRDIERVLYFEAYIVVDPGLSTLERGQLLNEEEFIQATAEFGDDFKAM
MGAEAIGELLRTIDIDGEVDRLREELRSTNSEAKIKKYAKRLKVLEGFQHSGIRPEWMIL
TVLPVLPPDLRPLVALDGGRFATSDLNDLYRRVINRNNRLKRLLEIKAPDIIVRNEKRML
QEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGP
ELRLHQCGLPKLMALELFKPFIFNKLVLRGLAPTPKAAKKMVENQEAVVWDILEEVIFEH
PVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLE
ARSLMMSSNNVLFPANGDPSIVPSQDMVLGLYYATRERINGKGEGMYFADVAEVQRAWDN
HVVDLQTRCTVRIREYDLNKQTGELTPKVVRYETTVGRALLSEILPKGMSFKELNITLKK
KEIAKLINRCFRKCGLNATVIFADRLKDNGYRLSTRAGISICVGDMTVPAQKEQLVRAAE
QEVKEIEAQYTSGLVTQGERYNKVVDIWGRTSDQVGKVMMQELSTEPTIDRHGQKVRQES
FNSVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCHTTHGVEMRALVEGGEVIQALRDR
VLGRVTAVDVINPDTNEVAIAAGTLIDEDLCDLIDELGIDMVKVRTPLTCETRYGLCAKC
YGRDLGRGSIVNAGESVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSIEAKSAGTI
QYSPAMRYVKSSKGELVVISRSGEVIVTEHGRERERHKVPYGATMLVRPDQEIRAGQQLA
TWDPMTRPIISEYAGRIKFENVIENVTVMNQVDEVTGLSSLVVIDPKKTTTKSGKASSAG
ILRPLVHLIDENGNEVKIPGTDHSVTIQLPVGAFVVIRDGQEIGMGEVLARIPTESQKTR
DITGGLPRVAELFEARSPKDAGMLAEVTGTVTFGKETKGKQRLIITDSEGNAHETLISKD
KTVLVHDGQVVQKGEEVVDGPVDPHDILRLLGIEELARYIVDEVQDVYRLQGVKINDKHI
EVIVRQMLRRVQITDPGDTNFIQGEQVERSEMLDENDRVIALGKRPASYDNVLLGITKAS
LSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHKAHKEKE
LAERIERETADPIESPFEGDAPVAPAAPVVQDPFFFVNFQEDAEHPITFRDPEPEPEGEG
EGEAAAQPEGEAKAKAEAPAEAPKAEEPKQEE
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcgcttaacgacattttcaaccaggtccagaaggacgagcatttcgatgcg
atccgcattggtcttgcgagtcccgagaagatccattcgtggtcgtacggcgaagtcaag
aagccggaaacgatcaactaccgtacccagaagccggaacgcgacggtcttttctgcgcc
aagatcttcggcccgacgaaggactacgagtgcatttgcggcaagtacaagcgcctcaag
aatcgcggcgtcatctgcgagaagtgcggcgttgaagtcacgctcgccaaggtgcgtcgc
gaacgcatgggtcacatcgacctggcgagccccgtcgcacacatctggttcctgaagagc
ctgccgagccgtatgggcatggtgctcgacatcccgctgcgcgacatcgaacgcgttctt
tacttcgaagcctatatcgttgtcgatccgggcctctcgacgctcgaacgcggtcagctg
ctcaacgaggaagagttcatccaggcgacggccgaattcggcgacgacttcaaggccatg
atgggtgccgaagccatcggcgaacttctccgtacgatcgacatcgacggcgaagtcgac
cgtctgcgcgaagaactccgctcgaccaactccgaagcgaagatcaagaagtacgccaag
cgcctcaaggtcctcgaaggcttccagcactcgggcatccgtcccgagtggatgatcctg
acggttctgccggtgctcccgcccgacctgcgtcctctcgtggcgctcgacggcggccgc
ttcgccacgtcggacctgaacgacctctaccgtcgcgtcatcaaccgcaacaatcgtctc
aagcgccttctcgaaattaaggcgccggacatcatcgtgcgcaacgaaaagcgcatgctg
caggaagcggtggactcgctcctcgacaacggtcgtcgaggcaaggcgatgacgggcgcc
aacaagcgtccgctcaagtcgctcgccgacatgatcaagggcaagtcgggtcgcttccgt
cagaacctgctcggtaagcgcgtcgactactcgggtcgttccgttattaccgtcggtccg
gaacttcgtctgcaccagtgcggtctgccgaagctgatggcgcttgagctcttcaagccc
ttcatcttcaacaagctcgtgctgcgcggtctcgcgcccacgccgaaggccgccaagaag
atggtggaaaaccaggaagcggtcgtttgggacatcctcgaagaagtcatcttcgagcac
cccgtgatgcttaaccgtgctcctacgctgcaccgtctcggtattcaggcgttcgaaccg
aagctcatcgaaggcaaggccattcagctccatccgctcgtttgcgcggcgttcaacgcc
gacttcgacggcgaccagatggccgttcacgtcccgctctcgctcgaagctcagctcgaa
gcgcgcagcctcatgatgtcttcgaacaacgtgctcttcccggcgaacggcgacccgtcg
atcgttccgtcgcaggacatggtgctcggtctctactacgccacgcgcgaacgcatcaac
ggcaagggcgaaggcatgtacttcgccgacgtcgccgaagttcagcgtgcctgggacaac
cacgtcgtcgatctgcagacgcgttgtacggttcgcatccgcgagtacgacctcaacaag
cagacgggcgaattgacgccgaaggtcgttcgttacgaaacgaccgtcggtcgcgcgctc
ctttccgaaatccttccgaagggcatgagcttcaaggagctcaacatcaccctgaagaag
aaggaaatcgccaagctcatcaaccgttgcttccgcaagtgcggtctcaacgccacggtg
atcttcgccgaccgtctgaaggacaacggctaccgtctctcgacgcgcgccggcatctca
atctgcgtgggcgacatgaccgtccccgctcagaaggagcagctcgtccgtgcggccgaa
caggaagtgaaggaaatcgaggcgcagtacacctcgggtctcgtcacgcagggcgaacgc
tacaacaaggtggtcgacatctggggccgcacctccgaccaggtcggcaaggtgatgatg
caggaactctcgaccgaacccaccatcgaccgtcacggtcagaaggttcgtcaggagtcc
ttcaacagcgtctacatgatggccgactccggggctcgaggctccgccgctcagatccgt
cagctcgccggcatgcgcggcctgatggccaagccggacggctcgattatcgaaacgccg
attaccgcgaacttccgcgaaggtctgaacgttctgcagtacttcatctcgacccacggt
gctcgtaagggtctggccgacacggctctgaagaccgcgaactcgggttacctgacgcgt
cgtctcgtcgacgtgacgcaggacctcgtggtggtcgaggacgattgccatacgacgcac
ggcgttgaaatgcgcgcgctcgtcgaaggcggtgaagtcatccaggcgctgcgcgaccgc
gtgctcggtcgcgtgacggcggttgacgtcatcaaccccgacacgaacgaagtcgccatc
gccgccggcaccctcatcgacgaagatctgtgcgatctcatcgacgagctcggcatcgac
atggtcaaggtccgcacgccgctcacctgcgaaacgcgttacggcctttgcgcgaagtgc
tacggtcgcgacctcggccgcggctcgatcgtcaacgcgggcgaatccgtgggcgtcatc
gccgctcagtcgatcggcgaaccgggcacgcagcttacgatgcgtacgttccacatcggt
ggtgccgcgtcgcgtgccgccgtcgcctcgagcatcgaagcgaagtcggccggtacgatc
cagtactcgcccgccatgcgctacgtgaagtcctcgaagggcgaactcgtcgtcatttcc
cgctcgggcgaagtgatcgtgaccgaacacggccgcgaacgcgaacgccacaaggtgcct
tacggcgccacgatgctcgtccgtccggatcaggaaatccgcgccggccagcagctcgcg
acgtgggacccgatgacgcgtccgatcatttcggagtacgccggtcgcatcaagttcgag
aacgtgatcgaaaacgtcacggtcatgaaccaggtcgacgaagtgacgggtctctcgagc
ctcgtcgtcatcgacccgaagaagaccacgacgaagtcgggcaaggcgagctccgcgggc
attctccgtccgttggtgcacctcatcgacgaaaacggcaacgaagtgaagatcccgggt
acggaccattccgtgacgattcagctgccggtgggcgccttcgtggtgatccgcgacggt
caggaaatcggcatgggcgaagtgctcgcgcgtatcccgaccgaatcgcagaagacccga
gacattaccggcggtctgccgcgagtggccgaactcttcgaagcccgcagcccgaaggat
gccggcatgctcgccgaagtgacgggtaccgtcacgttcggtaaggaaacgaagggcaag
cagcgtctcatcatcaccgacagcgaaggcaacgcgcacgaaacgctcatcagcaaggac
aagaccgttctcgttcacgacggtcaggtcgtgcagaagggcgaagaggtggtcgacggt
ccggtggatccgcacgacatcctgcgtctgctcggtatcgaagagctcgctcgctacatc
gtcgacgaagttcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatc
gaagtgattgttcgtcagatgctgcgccgcgttcagatcaccgatccgggcgacacgaac
ttcatccagggcgaacaggtcgaacgctccgaaatgctcgacgagaacgatcgcgtgatc
gcgctcggcaagcgtccggcgtcgtacgacaacgtgctcctcggtatcacgaaggcctcg
ctctcgacggacagcttcatctcggccgcttcgttccaggaaacgacgcgcgttctgacg
gaagccgccatcatgggcaagcgcgacgaactgcgcggcctgaaggaaaacgtgatcgtc
ggtcgcctgattcctgccggtacgggtcttgcctaccacaaggctcacaaggaaaaggaa
cttgccgaacgcatcgagcgcgaaacggccgatccgatcgagtcgcccttcgaaggcgac
gcaccggtcgctcccgccgctccggtcgtgcaggatccgttcttcttcgtgaacttccag
gaagacgccgaacatccgatcaccttccgtgatccggaacccgagcccgaaggcgagggt
gaaggcgaagccgcggctcagcccgaaggcgaagccaaggccaaggccgaagctccggcc
gaagctccgaaggccgaagagcccaagcaggaagagtaa
DBGET
integrated database retrieval system
