Streptomyces viridosporus: CP969_18035
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Entry
CP969_18035 CDS
T07568
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
svd
Streptomyces viridosporus
Pathway
svd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
svd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CP969_18035
09124 Replication and repair
03420 Nucleotide excision repair
CP969_18035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svd03021
]
CP969_18035
03400 DNA repair and recombination proteins [BR:
svd03400
]
CP969_18035
Enzymes [BR:
svd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP969_18035
Transcription machinery [BR:
svd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CP969_18035
DNA repair and recombination proteins [BR:
svd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CP969_18035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
ETAA1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QEU86379
UniProt:
A0A5J6FTF2
LinkDB
All DBs
Position
3919127..3920770
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AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQADDCRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVQYSRYPVPHALLVDIADTMDRYGRLSLVKHPAHGLVLTSTDRPVLEEVLR
SKRIAPLVGARIDPDTVAVHPSERGQIKQVLLKLGWPAEDLAGYVDGEAHPIELREDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAQSTTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEAIVRRFAGQQILVIGQYIDQ
LDELGEHLDAPVIKGETSNAQREKLFEAFRQGEISVLVVSKVANFSVDLPEATVAVQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DEILAES
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggtccgctcatcgtccagtccgacaagaccctgctcctcgaggtcgaccacgag
caggccgacgactgccgtcgcgccatcgcgccgttcgccgagctggagcgggcccccgag
cacatccacacctaccgggtgaccccgctcggcctgtggaacgcgcgggcggccgggcac
gacgccgagcaggtcgtcgacgcgctggtgcagtacagccgctacccggtgccgcacgcg
ctgctggtggacatcgccgacacgatggaccgctacggccggctcagcctggtcaagcac
ccggcgcacgggctcgtcctcaccagcaccgaccggccggtgctggaggaggtgctgcgc
tcgaagcggatcgccccgctcgtcggcgcccggatcgacccggacaccgtcgccgtgcac
ccctcggagcgcggccagatcaagcaggtgctgctgaagctgggctggcccgccgaggac
ctcgccgggtacgtggacggcgaggcgcacccgatcgagctgcgcgaggacggctgggcg
ctcaggccgtaccagaagcaggccgtggagaacttctggcacggcggctccggtgtggtc
gtcctcccctgcggcgcgggcaagacgctggtcggcgccggttcgatggcgcaggcgcag
tccaccacgctgatcctggtcaccaacaccgtctcggcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcgggacgaggaaggag
atccgccccgtcaccatcgccacctaccaggtgctgacgacccggcggaagggcgtctac
ccccacctggagctgttcgactcccgggactggggcctgatcgtctacgacgaggtgcac
ctgctgcccgcccccgtcttcaagttcacggcggacctgcaggcccggcggcggctcggg
ctgaccgcgacgctggtgcgcgaggacggccgcgagtcggacgtgttctcgctgatcgga
ccgaagcggttcgacgcgccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtggaggtccgggtcaacctcaccgactccgagcggctggcgtacgccaccgcc
gagacggaggagaagtaccggttctgtgcgacgaccgcgaccaagcggaaggtgacggag
gcgatcgtccggcgcttcgccggccagcagatcctcgtcatcgggcagtacatcgaccag
ctcgacgagctgggcgagcacctggacgcaccggtgatcaagggcgagacgtcgaacgcc
cagcgggagaagctgttcgaggccttccggcaaggcgagatcagcgtgctggtggtgtcc
aaggtcgcgaacttctcggtcgacctgccggaggcgacggtggccgtccaggtgtcgggc
accttcgggtcgcggcaggaggaggcccagcggctcggccgggtgctgcggccgaaggcc
gacgggcaccaggcccacttctactccgtggtcgcccgggacaccatcgaccaggacttc
gcggcgcaccgccagcggttcctggcggagcaggggtacgcgtaccggatcgtggacgcg
gacgagatcctcgccgagagctga
DBGET
integrated database retrieval system
