Streptomyces venezuelae: SVEN_4345
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Entry
SVEN_4345 CDS
T02274
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sve
Streptomyces venezuelae
Pathway
sve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVEN_4345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sve03021
]
SVEN_4345
03400 DNA repair and recombination proteins [BR:
sve03400
]
SVEN_4345
Enzymes [BR:
sve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVEN_4345
Transcription machinery [BR:
sve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SVEN_4345
DNA repair and recombination proteins [BR:
sve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SVEN_4345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
CCA57631
UniProt:
F2RIS5
Structure
PDB
PDBj
LinkDB
All DBs
Position
4699453..4702989
Genome browser
AA seq
1178 aa
AA seq
DB search
MQGTGTRVVSPSPRKDPLLAASRNASTNTNNGASTAPLRISFAKIKEPLEVPNLLALQTE
SFDWLLGNAAWKARVEAALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPP
KNSIDECKDRDFTYGAPLFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVV
VSQLVRSPGVYFDSSIDKTSDKDIFSAKIIPSRGAWLEMEIDKRDLVGVRIDRKRKQSVT
VLLKALGWTTEQILQEFGEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTL
LENLYFNPKRYDLAKVGRYKVNKKLGADEPLDAGVLTTDDVIATIKYLVKLHAGETETIG
ENGNEIVVETDDIDHFGNRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTL
INIRPVVASIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHP
SHYGRMCPIETPEGPNIGLIGSLASYGRVNAFGFIETPYRKVVDGQVTDEVDYVTADEED
RFVIAQANAALDEELRFSENRVLVRKRGGEVDYVEPSDVDYMDVSPRQMVSVATAMIPFL
EHDDANRALMGANMMRQAVPLIKSEAPLVGTGMEYRCATDAGDVLKAEKDGVVQELSADY
ITVANDDGTYITYRLHKFSRSNQGTSVNQKVVVDEGDRVIEGQVLADGPATEDGEMALGK
NLLVAFMPWEGHNYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVS
EEVLADLDERGIIRIGAEVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSL
KVPHGEIGKIIGVRVFDREEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISK
ILPIEDMPFLEDGTPVDIILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAQRL
QAIGADKVAPGTNVATPVFDGAREDELAGLLNHTIPNRDGERMVLPTGKARLFDGRSGEP
FPDPISVGYMYILKLHHLVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEA
YGAAYALQELLTIKSDDVTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVL
SSDGMSIEMRDTDEDVFRAAEELGIDLSRREPSSVEEV
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaccggtacgcgcgtagtgagtccgagccctcggaaggaccccctcttggcc
gcctcgcgcaacgcctcgaccaatacgaacaacggcgcaagcaccgccccgctgcgcatc
tcctttgcaaagatcaaggagcccctcgaggttccgaacctcctcgcgctgcagaccgag
agctttgactggctgctcggcaacgccgcctggaaggctcgcgtcgaggctgcccttgag
tcgggacaggacgtccccacgaagtccggcctggaagagatcttcgaggagatctcgccg
atcgaggacttctccgggtcgatgtcgctgaccttccgcgaccaccgcttcgagccgccg
aagaactcgatcgacgagtgcaaggaccgtgacttcacgtacggcgccccgctcttcgtc
accgccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtcttcatgggc
gacttcccgctcatgacgaacaagggcaccttcgtcatcaacggcaccgagcgtgtcgtg
gtgtcgcagctggtccgttcgcccggtgtctacttcgactcctccatcgacaagacgtcc
gacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctggagatggag
atcgacaagcgcgacctggtcggtgtccgcatcgaccgcaagcgcaagcagtccgtcacc
gtcctcctcaaggctctcggctggaccaccgagcagatcctccaggagttcggcgagtac
gagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgacgcgctgctc
gacatctaccgcaagctgcgtccgggcgagccgccgacccgtgaggccgctcagacgctg
ctcgagaacctctacttcaacccgaagcgctacgacctcgcgaaggtcggccgctacaag
gtgaacaagaagctcggcgcggacgagccgctggacgccggcgtgctcaccaccgacgac
gtcatcgccacgatcaagtacctggtcaagctccacgcgggcgagaccgagacgatcggc
gagaacggcaacgagatcgtcgtcgagaccgacgacatcgaccacttcggcaaccgtcgt
ctgcgcaacgtcggcgagctcatccagaaccaggtccgcacgggtctggctcgtatggag
cgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccgcagaccctg
atcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagccagctgtcc
cagttcatggaccagaacaacccgctgtcgggtctgacgcacaagcgtcgtctctcggcg
ctgggccctggtggtctctcccgtgagcgggccggcttcgaggtccgagacgtgcacccg
tcccactacggacgcatgtgcccgatcgagaccccggaaggcccgaacatcggtctgatc
ggttcgctcgcctcgtacggccgcgtcaacgcgttcggcttcatcgagacgccgtaccgc
aaggtcgtcgacggccaggtcaccgacgaggtcgactacgtcaccgccgacgaggaggac
cgcttcgtcatcgcccaggccaacgccgcgctcgacgaggagctccgcttctccgagaac
cgcgtcctggtccgcaagcgtggcggcgaggtcgactacgtcgagccgtcggacgtggac
tacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatcccgttcctc
gagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcaggcggtgccg
ctgattaagtcggaggccccgctcgtcggcaccggcatggagtaccgctgcgccaccgac
gccggcgacgtgctcaaggccgagaaggacggcgtcgtccaggagctgtcggccgactac
atcacggtcgccaacgacgacggcacgtacatcacgtaccgcctgcacaagttctcccgc
tcgaaccagggcacctcggtcaaccagaaggtcgtcgtcgacgagggcgaccgcgtgatc
gagggccaggtcctcgccgacggtcccgccaccgaagacggcgagatggcgctcggcaag
aacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcgatcatcctg
tcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggagcacgaggtc
gacgcccgtgacaccaagctcggtccggaggagatcacccgggacatcccgaacgtctcc
gaggaggtcctcgccgacctcgacgagcgcggcatcatccggatcggtgccgaggtcgtc
gccggcgacatcctggtcggcaaggtcacgcccaagggcgagaccgagctgaccccggag
gagcgcctgctccgcgcgatcttcggtgagaaggcccgtgaggtccgtgacacctcgctg
aaggtgccgcacggcgagatcggcaagatcatcggcgtccgcgtcttcgaccgcgaggag
ggcgacgagcttcccccgggcgtgaaccagctggtccgcgtctacgtcgcccagaagcgc
aagatcaccgacggtgacaagctcgccggccgtcacggcaacaagggcgtcatctcgaag
atcctgccgatcgaggacatgccgttcctcgaggacggcaccccggtcgacatcatcctc
aacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatccacctcggc
tggctcgccagccgcggctgggacgtctccggcctcgcggacgagtgggcgcagcgcctc
caggcgatcggcgccgacaaggtcgcccccggcaccaacgtcgccaccccggtcttcgac
ggtgcgcgtgaggacgagctcgcgggtctgctcaaccacaccatcccgaaccgcgacggc
gagcgcatggtgctcccgaccggtaaggcgaggctgttcgacggccgctccggcgagccg
ttcccggacccgatctccgtcgggtacatgtacatcctcaagctgcaccacctggtcgac
gacaagctccacgcgcgttcgaccggcccgtactcgatgatcacccagcagccgctgggt
ggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggcgctggaggcg
tacggcgccgcttacgccctccaggagctgctgacgatcaagtccgacgacgtgaccggc
cgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccctgagcccggcatcccc
gagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctcaacgtggaggtgctg
tcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttccgcgcagcg
gaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagaggtctga
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integrated database retrieval system
