Streptomyces venezuelae: SVEN_5493
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Entry
SVEN_5493 CDS
T02274
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sve
Streptomyces venezuelae
Pathway
sve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SVEN_5493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sve03019
]
SVEN_5493
03400 DNA repair and recombination proteins [BR:
sve03400
]
SVEN_5493
Enzymes [BR:
sve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SVEN_5493
Messenger RNA biogenesis [BR:
sve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SVEN_5493
DNA repair and recombination proteins [BR:
sve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SVEN_5493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
AAA_30
RecQ_Zn_bind
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
CCA58779
UniProt:
F2R7X0
LinkDB
All DBs
Position
complement(5961447..5963630)
Genome browser
AA seq
727 aa
AA seq
DB search
MTHADPLEDRAALRTAADAVLARLVSDPTGEARLREDQWRAIEALVADRRRALVVQRTGW
GKSAVYFVATSLLRERGSGPTVIVSPLLALMRNQVEAAARAGIRARTINSSNTEEWDTVQ
EEVSAGEVDVLLVSPERLNNPDFRDQVLPRLAAATGLLVVDEAHCISDWGHDFRPDYRRL
RTMLADLPSGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLGVVRLP
DAAHRLAWLADHLGELPGSGIIYTLTVAAADEVTAYLRQCGHTVSSYTGRTENADRQQAE
DDLQGNRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLL
PGQEDEAIWRYFASVAFPPEEQVRRTIDVLAQAGRPLSLPALEPLVELRRTRLETMLKVL
DVDGAVRRVKGGWESTGRPWVYDTERYAWVARQRAAEQQAMRDYASASGCRMEFLRRQLD
DEEAAPCGRCDNCAGSRFDPKVSDAALDAAKGELGRPGVEVEPRKMWPTGLAAVGVDLKG
RIPVGEQAFGGRALGRLSDIGWGNRLRPLLADTATDGPVPDDVVQAVVHVLADWAKGPGG
WASGAPDAPDRPAGVVTVASHRRPRLVGSLGQRIAEIGRMPLLGEVEYTPEAEELRLSRT
NSAQRVVGLQKTLTVSAELAGRLASAGGPVLLVDDLSDSGWTLAVAARLLRRAGAEGVFP
LVLAVQG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgcagaccccctggaagaccgcgccgcgctgcggaccgccgccgatgccgtg
ctcgcccgtctcgtctccgacccgacgggcgaggcgagactgcgcgaggaccagtggcgg
gccatcgaggccctggtggccgaccggcgtcgggccctcgtggtgcagcggaccggctgg
ggcaagtcggccgtgtacttcgtggcgacctcgctgctgcgcgagcgcggcagcggtccg
accgtgatcgtctcccccctcctcgcgctgatgcgcaaccaggtggaggcggccgcccgg
gcgggcatccgcgcccggacgatcaactcgtcgaacacggaggagtgggacacggtccag
gaggaggtctccgccggtgaggtggacgtgctcctggtgagcccggagcggctcaacaac
cccgacttccgcgatcaggtcctcccgcgcctcgcggccgcgaccgggctgctcgtcgtc
gacgaggcgcactgcatctcggactggggccacgacttccggcccgactaccgccgcctg
cgcaccatgctcgccgacctgccgtccggggtcccggtgctcgccaccaccgccacggcc
aacgcccgggtgaccgcggacgtggccgagcagctggggacgggcgcgggcacggacgcc
ctggtgctgcgcgggcctctggaccgggagagcctcagcctgggcgtggtcagacttccg
gacgcggcccatcggctcgcctggctcgccgaccatctcggcgagctgccgggctccggg
atcatctacaccctgacggtcgccgcggccgacgaggtcacggcctacctgcgccagtgc
gggcacacggtctcctcgtacacgggccgcacggagaacgccgaccggcagcaggcggag
gacgatctccagggcaaccgggtcaaggcgctggtggcgacctcagccctcggcatgggc
ttcgacaagccggacctggggttcgtcgtgcacctcgggtcgccttcctccccgatcgcc
tactaccagcaggtcggccgtgccgggcgcggggtggagcacgccgaggtccttctgctg
cccgggcaggaggacgaggcgatctggcgctacttcgcctcggtcgccttcccgcccgag
gagcaggtgcgccgcacgatcgacgtgctggcgcaggccggccggcccctgtcgctgccc
gcgctcgagccgctggtggagctgcgccggacacgtctggagacgatgctcaaggtcctc
gacgtggacggtgcggtgcgtcgggtgaagggcggatgggagagcacgggccggccctgg
gtgtacgacacggagcgctacgcgtgggtggcgcggcagcgggcggccgagcagcaggcg
atgcgtgactacgcgtcggcttcggggtgccggatggagttcctgcggcgccagctcgac
gacgaggaggccgctccgtgcggtcgctgcgacaactgcgcgggtagccggttcgatccg
aaggtgtccgacgcggcgctggacgcagccaagggagagttggggcggccgggcgtggag
gtcgagccccggaagatgtggccgacgggactcgccgcggtcggggtcgatctgaagggt
cgcatcccggtcggcgagcaggccttcggcgggcgggcgctcgggcggctctcggacatc
ggctggggcaaccggctgcgtccgctgctggccgacaccgccacggacggtccggttccg
gacgatgtggtgcaggcggtcgtccatgtgctcgccgactgggccaaggggccgggaggt
tgggcctcgggtgcaccggatgccccggaccggcccgccggggtggtcaccgtggcctcc
caccgcagaccccggctggtgggctcgctcggacagcggatcgccgagatcggccggatg
cccctgctcggcgaagtggagtacacacccgaggcggaggagctgcggctgtcgcggacc
aacagcgcccagcgggtggtcggcctgcagaagaccctgacggtctcggcggagttggcg
ggtcgtctcgcctcggccggtggtccggttctgctcgtcgacgacctgtccgacagcggc
tggacactcgcggtcgcggcgcggttgctgcgtcgggccggagcggaaggagtgttcccg
ctggtgcttgccgtccaggggtga
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