Streptococcus viridans: NCTC3166_00207
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Entry
NCTC3166_00207 CDS
T08046
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
svf
Streptococcus viridans
Pathway
svf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC3166_00207 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svf03021
]
NCTC3166_00207 (rpoB)
03400 DNA repair and recombination proteins [BR:
svf03400
]
NCTC3166_00207 (rpoB)
Enzymes [BR:
svf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC3166_00207 (rpoB)
Transcription machinery [BR:
svf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC3166_00207 (rpoB)
DNA repair and recombination proteins [BR:
svf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC3166_00207 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
NusG_add
Motif
Other DBs
NCBI-ProteinID:
VED66423
UniProt:
A0A3S4MQV5
LinkDB
All DBs
Position
1:171519..175088
Genome browser
AA seq
1189 aa
AA seq
DB search
MAGHDVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKDFLDHGLKEVFEDVLPISNFTD
TMELEFVGYEIREPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSELVRNTVEKDIHKNPMDSRTDEALKE
IYERLRPGEPKTAESSRSLLVARFFDPRRYDLAPVGRYKINKKLNIKNRLLNQTLAEPLV
DAETGEILVEAGTVMTRDVIESISEHLDGDLNKIVYTPNDSAVLTEPVVLQKFKVVAPTD
PDRVVTIIGNANPDDKVRTITPADILAEMSYFLNLAEGLGRVDDIDHLGNRRIRAVGELL
ANQVRLGLSRMERNVRERMSVQDNEVLTPQQIINIRPVTAAIKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYGH
LNKYGFIQTPYRKVDREKGVVTNEIVWLTADEEDEYIVAQSNSKLNEKGGFSEPIVMGRH
RGNNQEFPSDQVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
YVGTGMEYQAAHDSGAAVIAQHDGKVIYADADKVEVRREDGSLDVYHIQKFRRSNSGTAY
NQRTLVKVGDVVEKGDFIADGPSMEKGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEDALRNLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGVVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIRVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWDTVREAGMDSDAKTILYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSMVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVNGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDKEVELRDLDEGEDDDVIHVDDLEKAREKAAKEARAAFEAEGKED
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgacgttcaatacgggaaacatcggacccgtcgtagtttttcaagaatc
aaagaagttcttgatttaccaaatttgattgaaatccaaacggattcatttaaagatttt
ctggatcatggtttgaaagaagttttcgaagatgtattgccaatttcgaacttcacagac
acaatggagttggaattcgtcggctatgaaatcagagaaccaaagtatactttggaagaa
gcacgtatccatgatgcgagctattctgccccaatctttgtaaccttccgtttggtcaac
aaggaaactggcgaaatcaaaactcaagaagtcttctttggtgatttcccaatcatgacc
gaaatgggaacctttatcatcaacggtggagagcggattatcgtatctcagctcgtccgt
tcaccaggtgtctacttcaatgataaggtggacaagaacggtaaggttggctatggatca
acggttattccaaaccgtggagcttggctagaacttgaaacagactcaaaagatattgct
tacactcgtatcgaccgtacgcgtaagattccatttacgaccttggttcgtgcccttggt
ttctctggagacgacgagatttttgatatctttggggatagcgaattggttcgcaacact
gttgaaaaagatatccacaaaaacccaatggattctcgcacagatgaagccctcaaagaa
atttatgagcgtcttcgtccaggtgagccaaaaacagcggaaagctcacgtagcttgttg
gtagcccgtttctttgacccacgtcgttatgacttggccccagttggtcgctacaagatc
aacaagaaacttaatatcaagaaccgtttgttgaaccaaactcttgcagaaccattggta
gatgcagaaacaggagaaatccttgtagaagctggtacagtgatgacccgcgatgtcatc
gaaagcatctcagaacatttggacggtgacttgaacaagattgtctacactccaaatgat
tcagcagtattgacagaaccagtcgttcttcaaaaattcaaggttgtggctccaactgat
ccagaccgcgttgtcaccatcatcggcaatgcgaatccagatgataaggttcgtaccatc
actccagccgatatccttgctgaaatgagctacttcctgaacttggctgaaggtcttggc
cgcgtggatgatatcgaccaccttggaaaccgtcgtatccgcgccgttggtgaattgctt
gccaaccaagtgcgtcttggactttcacggatggaacgtaacgttcgtgaacgcatgtct
gttcaagataatgaagtgttaacacctcaacaaatcattaacattcgtccagtaactgca
gcaatcaaagaattctttggttcttcacaattgtctcagttcatggaccaacacaacccg
ctttctgagttgtcccacaaacgacgtttgtctgccttagggcctggtggtttgacacgt
gaccgtgctggatatgaagtccgtgacgtgcactacactcactatggtcggatgtgtcca
attgaaacacctgaaggaccaaacatcggtttgatcaataacttgtcatcctacggacac
ttgaacaaatatggtttcatccaaacaccatatcgtaaagtagaccgtgaaaaaggtgtg
gtcactaacgaaatcgtttggttgacggctgatgaagaagatgagtacattgtggcccag
tccaactctaagttgaacgaaaaaggtggtttttctgagccaatcgttatgggacgtcac
cgtggtaacaaccaagagttcccatctgatcaagtcgactacatggacgtatctccaaaa
caggtagttgccgttgcaacagcatgtattccgttcttggaaaacgatgactccaaccgt
gccctcatgggtgccaacatgcaacgtcaggctgtgccattgatcgatccaaaagcgcct
tacgtgggtacaggtatggaataccaagcagcccatgactcaggagctgcagtcattgct
caacatgatggtaaggttatttatgcggatgcagacaaggtagaagttcgccgggaagat
ggatcccttgatgtttaccatatccaaaaattccgtcgttcaaactcaggaactgcctac
aaccaacgtacccttgtaaaagttggcgatgtcgttgaaaaaggcgactttatcgcagac
ggtccatcgatggaaaaaggggaaatggcccttggtcaaaacccaatcgttgcctacatg
acttgggaaggttacaacttcgaagatgccgttatcatgagcgaacgcttggtgaaagaa
gatgtctatacatctgttcacttggaagaattcgaatcagaaacgcgcgatactaagtta
ggccctgaagaaatcactcgtgaaattccaaacgttggggaagatgctctcagaaacctt
gatgaaatgggaattatccgtattggtgcggaagtgaaagaaggcgatatcttagttggt
aaggtgacaccgaagggtgaaaaagacctttctgctgaagaacgtctcctccacgctatc
tttggagataaatctcgtgaagtgcgggatacttctcttcgtgtacctcatggtggagat
ggtgtcgttcgcgatgtcaagatctttacgcgggcaaacggagatgaattgcaatcgggt
gtcaatatgttggttcgtgtttacatcgcacaaaaacgtaagatccgcgtcggagataag
atggccggtcgtcacggaaacaaaggggttgtttctcgtattgttcctgttgaagacatg
ccatatcttccagatggtacaccggttgatatcatgttgaacccacttggggtgccatca
cgtatgaatatcggtcaggttatggaacttcaccttggtatggcggctcgtaacttgggc
atccacatcgcaacaccagtctttgacggagcaagctcagaagacctctgggatactgtt
cgtgaagcaggtatggatagcgatgccaagaccattctttacgatggccgtacaggtgag
ccatttgacaaccgtgtttctgtcggtgtcatgtacatgatcaagcttcaccacatggtt
gatgataaattgcacgctcgttctgtcggaccatactcaatggttacccaacaaccactc
ggaggtaaagctcagtttggtggacaacgtttcggggaaatggaagtttgggcccttgag
gcttatggtgcgtctaatgtccttcaagaaatcttgacctacaagtcagacgatgtcaac
ggacgtttgaaagcttatgaagcgattaccaaaggaaaaccaattccaaaaccaggtgtg
ccagagtccttccgagtactcgtaaaagaattgcaatcacttggattggatatgcgtgtc
ttggatgaggatgacaaggaagtcgaacttcgcgatcttgacgaaggggaagacgacgat
gtcatccacgtagatgatctagaaaaagcacgtgaaaaagcagctaaggaagctcgcgca
gctttcgaagctgaagggaaagaagattaa
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