Sturnus vulgaris (common starling): 106855787
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Entry
106855787 CDS
T08833
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106855787 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106855787 (CNOT1)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106855787 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106855787 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
106855787
NCBI-ProteinID:
XP_014736190
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGSQAHTWNVEVLIDVLKELNPTLDFKVVTYE
LDHPGFQIRDSKGLNIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITMAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQDLVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQVQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRALAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcacattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcgtacgccattgacaatcccttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtaatttttggtctggctttactgaactcgttcagctcagat
ctgcgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctctttgggcagaagggagcctttggggtaggacag
gagcagattgacgctttccttaaaacattacgtagagattttccccaggagcgttgcccc
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtgcaagtgtggaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagggttttggggatgatggctcgaact
cattcgggattgacggatggaattccattacaatctatttcggctcctggcagtgggatt
tggagtgatggcaaagataagagtgatggaagccaagcccatacctggaatgtggaggtc
ttgattgatgttcttaaagagctgaaccctaccctggacttcaaagtagtaacatatgaa
ttggaccatccaggatttcagattcgtgatagcaagggcctgaatattgtcgtttttggc
atccagagagggctgggcatggaggtttttccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcatccaacattccctcataaacccagacatcttctgt
tttgctgactacccttgccatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgagtctctgttacgattg
gcagaagtggggcagtatgaacaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgctggtattggccttattgcagatcaacacgtcctggcataccttgcgccat
gaactcatctccacgctcatgccaattttccttggcaaccatcccaactcagccatcatt
ttgcactatgcatggcatggacagggtcaatctccttcaattcgtcagcttatcatgcat
gccatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcacaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggaacctttcatccaggcctgtatgactttctta
aagagaagatgtccatctatcctgggtggtcttgctccagagaaggatcagcccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcctgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagcaaactgcagtaatgtc
atgaacaaggctcggcagcccccacctggagtcatgcccaaaggacgcccgcccagtgcg
agcagcttggatgccatctctcctgtgcagatcgactcgcttgcaggaatggcctctctt
agtttaggtggctcagctgctcctcacacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagcactcctcagtcaccagcaaaagctttcccacctctttccacccag
aaccagacaaccggtttcagtggcattggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaactggagccctgggccttcctgcagtgaac
aatgatccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaggaaatagatgatgaggcaaacagctacttccagcggatttacaaccatccacca
cacccaaccatgtctgtggatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaatatcgt
ttctttccccagtacccggataaagagctgcacataacagcctgtctcttcgggggcatc
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccacatcatttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaggttccagcaaaagctcctcttgctggtcaagtcagcactatagtg
accacctcaaccaccaccactgtggcaaaaaccattacaatcacccgaccaactggagtc
agcttcaagaaagatgtgccgccttccattaatactaccaacattgatacgctgttagta
gcaacagaccaaacagagaggattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataacctgtctcagtcaaatatgacacagaaggtggaagaattgaaggaa
acagtgaaagaagagttcatgccctgggtatcacagtatctcgtgatgaaaagagtcagt
attgagcctaactttcacagcttatattcaaacttccttgacacgcttaagaatccagag
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctattgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcactggctggga
atgataacaatggctaaaaataagcccatcttgcacacggatttggatgtgaagtcacta
ctactggaagcatacgttaagggacagcaggaattgctttatgtagtgccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccatggacaatg
gccattatgaatgttttagctgagctgcatcaggagcatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcactagacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgtctgaaaaatctggatgagcagctgtctgctccaaag
aaggatgtcaagcagccagaagagctaccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagttatcat
gacatcaacgtctattctttaggagggttggctccacacattaccttaaatccaacgatc
ccgctgttccaggcccacccgcagctgaagcagtgcgtgcggcaggcgatcgagcgcgcc
gtgcaggacctcgtccatccggtggtcgacagatccatcaagattgccatgacaacctgt
gaacagatagtcaggaaggactttgccctggattcagaggagtctcgcatgcgtgtggct
gctcaccacatgatgaggaacctgactgctgggatggccatgattacctgcagagagcct
ttgctgatgagcatagctaccaacttgaaaaatagctttgctactgcactgagggcagcc
tccccacagcagagggacatgatggagcaggcggctgcccagttagcacaggataactgt
gagcttgcctgctgcttcatccagaagacagctgtggaaaaggcaggccctgagatggac
aagaggcttgcaactgaatttgagctcaggaaacatgctaggcaagaggggcgtcgctac
tgcgatcctgttgtgttaacgtaccaggctgagcggatgccagaacagatcaggttaaag
gttggaggtgtggacccaaaacagctggctgtttatgaagagtttgcacgcaacgtccct
ggcttcttacccaccaatgacttaactcagcccacgggattcttggctcagcctatgaag
caagcttgggctacagatgatgtagcacagatttatgacaaatgtatgacagaactggag
cagcatctgcagtccattccacacaccctggccatgaatcctcaagttcaagcattgcgt
agcctcttggaggcggtggtagtggctcggaactcccgggatgctattgctgctcttgga
ctactgcagaaggctgtagagggcttgctggatgccaccagcggggctgatgctgacctc
ctgctccgctatcgtgagtgtcacctgctggtgctgaaggctctgcaggatggccgtgcc
tatggatctccttggtgtaacaagcaaatcactaggtgcctgatcgaatgcagagatgag
tacaagtacaatgtggaagctgtggagctgctaatccgcaatcaccttgttaacatgcag
cagtatgaccttcacttggctcagtccatggagaatggcttgaactacatggctgtggca
tttgccatgcagttggtaaagatcttgttggtggatgagagaagtgttgcccatgtaaca
gaagcagatctgtttcacaccattgagacactcatgagaattaatgctcattccagagga
aacgccccggaaggattaccccagctgatggaagtggtccgatcaaactatgaagcaatg
attgaccgtgctcatggaggtcctaatttcatgatgcattcaggaatttcccaagcttct
gagtatgatgacccaccaggcctgagggagaaggcagaatacctgctgagggagtgggtg
aacctctaccattcagctgcagcaggccgtgacagtaccaaagcattctctgcgtttgtt
ggacagatgcaccagcaggggatcctgaaaacggatgacctgatcacccgttttttccgt
ctttgcactgaaatgtgtgttgagatcagctatcgagccctggctgagcagcagcacaat
cctgcagccaaccccactatgattcgggccaagtgctaccacaacctggatgcctttgtg
cgactcattgcactgctggtgaagcactctggggaggcaaccaacacagtcacaaagatt
aacctcctgaataaggttcttggtattgtggtgggagttcttctgcaagaccatgatgtt
cggcagagtgagtttcagcaacttccttaccatcgcattttcatcatgttgctgttggaa
ttaaatgctcctgagcatgtgctggagaccatcaacttccagacactcacagctttctgt
aacacatttcacatcctgaggcctacaaaagctccaggttttgtttatgcctggctggaa
ctgatctcccatcggatatttattgcaagaatgctggcacatacaccacagcagaagggt
tggcctatgtatgcccagttattgatcgatctattcaagtatttggctcctttccttaga
aatgtggaactcaccaaacctatgcaaattctttacaagggcactctgcgtgtgttgctg
gtcttgttgcatgatttcccagaatttctctgtgactaccactatggattctgtgatgtg
atcccacctaactgtattcagctaaggaatctgatcctgagtgccttcccacggaacatg
aggcttccagaccctttcacccccaacctaaaggtggacatgttaagtgagattaatatt
gctccacgaatacttacaaatttcactggagtgatgccacctcagttcaagaaagatttg
gattcctatctcaaaactcgttctccagtcacctttttgtctgacttgcgaagcaaccta
caagtatccaatgaacctggcaaccgctacaacatccagctgattaatgcactggtgctc
tacgtaggtactcaagctattgcacacattcacaacaaaggcagcacaccctccatgagc
accattacccactcagctcacatggacatcttccagaatttggcagtagacctggatact
gaaggccggtacctgttcctgaacgccatcgccaaccagctgcgctaccccaacagtcac
acccactacttcagctgcaccatgctctacctgtttgcagaggccaacacagaggccatc
caggagcagatcaccagggttctcttggaacgactgattgtaaataggcctcatccctgg
gggctccttattacgttcattgagctgataaaaaatccagcctttaagttctggaaccat
gagtttgttcactgcgctccagaaattgagaagttgttccagtcggttgcacaatgctgc
atggggcagaagcaggcccagcaagttatggaagggactggtgccagttag
DBGET
integrated database retrieval system
