Streptomyces violaceusniger: Strvi_5892
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Entry
Strvi_5892 CDS
T01602
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Strvi_5892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_5892
Enzymes [BR:
svl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Strvi_5892
DNA repair and recombination proteins [BR:
svl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Strvi_5892
Prokaryotic type
Strvi_5892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEM85400
UniProt:
G2NV58
LinkDB
All DBs
Position
6765083..6765760
Genome browser
AA seq
225 aa
AA seq
DB search
MAARPLNEIVEAGWAKALEPVEERIAAMGDFLRAEIAAGRTYLPAGPNVLRAFQQPFDEV
KVLIVGQDPYPTPGHAVGLSFSVAPEVRPLPGSLENIYRELHTDLGLPRPSNGDLTPWTQ
QGVLLLNKALTTAPRRPAAHRGKGWEDVTEQAIRALAGRGRPLVSILWGRDARNVRPLLG
ALPAVESAHPSPMSADRGFFGSRPFSRANDLLVQQGAQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgacccttgaatgaaattgtggaagcgggctgggccaaggcacttgagccc
gtcgaggaacgcatcgcggcgatgggcgacttcctgcgggccgagatcgcggcaggccgt
acctatctgcccgccgggccgaatgtgctgcgcgccttccagcagcccttcgacgaggtg
aaggtgctgatcgtgggtcaggacccgtatccgacacccggacacgcggtgggcctcagc
ttctcggtggcgcccgaggtccggccgcttcccggcagcctggagaacatctaccgcgag
ctgcacaccgacctcggcctgccgcgcccgtccaacggcgatctgacgccctggacccag
cagggcgtcctgctgctcaacaaggcgctcaccacggctccgcgccggcccgccgcccac
cgcggcaagggctgggaggacgtcaccgagcaggccatccgggcgctggccgggcgcggc
cgccccctggtctccatcctgtggggccgcgacgcccgcaacgtacggccgctgctgggc
gcccttccggcggtcgagtccgcgcacccctcccccatgtccgccgaccgggggtttttc
ggctcacgtccgttcagccgcgccaacgacctgctcgtacagcagggggcccaacccgtg
gactggcgccttccctga
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