Streptomyces violaceusniger: Strvi_7573
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Entry
Strvi_7573 CDS
T01602
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl00040
Pentose and glucuronate interconversions
svl01100
Metabolic pathways
svl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Strvi_7573
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Strvi_7573
Enzymes [BR:
svl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Strvi_7573
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
AEM86921
UniProt:
G2P733
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All DBs
Position
complement(8635984..8637114)
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AA seq
376 aa
AA seq
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MRSTHDHGTTDNIGDVTDATRATSALSTPVTARNRRRLTAVAAGVTAALALGGLSTVSAH
DADSTDSARSESTRTAAAGSATAARLAVETTPIGFGAGTTGGGNATATTVISLDAFKTAV
TGDKAKVVKVSGLFSLTGQVDIGSNTTVLGVGSGSGFTGGGLRLKEATNVIVRNLNLGKP
RKPSDAITVQKSTRVWIDHNTLSADRDHDKDYYDGLLDISHGSDNITVSWNRFADHFKGS
LVGHSDNNASEDTGHLKVTYHHNWFANVYSRIPSLRFGTGHFYDNYVQGAETGVHSRMGA
QTLVENNVFRDTEVAVTTSRDSDIDGYAVLRGNDLGGAATEVSQTGGFTTPPYAYTAEPA
SSVVASVTAQAGAGKL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgacgcacgaccacggcaccacggacaacatcggtgacgtcaccgacgccacc
cgtgccaccagcgccttgagtactcctgtcaccgcccgcaaccggcgccggctgaccgcg
gtcgccgcgggcgtcaccgcggcgctcgccctcggcggcctctccacggtctccgcccat
gacgcggactcgaccgactccgcacgctccgagagcacacgcaccgccgccgcgggctcc
gccaccgccgcgcgtctcgccgtcgagaccacccccatcggcttcggcgccggcaccacg
ggcggtggaaacgccaccgccaccaccgtgatctccctggatgccttcaagaccgccgtc
accggcgacaaggccaaggtggtcaaggtctcggggctgttctccctcaccggccaggtg
gacatcggctccaacaccaccgtgctgggcgtgggttcgggctccggcttcaccggcggc
ggactgcggctgaaggaggcgacgaacgtcatcgtccgcaacctcaacctcggcaagccc
cggaagccgtccgacgccatcaccgtgcagaagtccacgagggtgtggatcgaccacaac
accctctcggccgaccgcgaccacgacaaggactactacgacggtctgctggacatcagc
cacggctccgacaacatcaccgtctcctggaacagattcgccgaccacttcaagggcagc
ctggtaggccacagcgacaacaacgcgagcgaggacaccggccacctcaaggtgacgtac
caccacaactggttcgcgaacgtctactcccgcatccccagcctgcgcttcggcaccggc
cacttctacgacaactacgtgcagggcgcggaaaccggtgtgcactcccggatgggcgcg
cagacgctggtggagaacaacgtcttccgcgacaccgaggtggccgtgaccaccagccgg
gacagcgacatcgacggctatgcggtgctgcgcggcaacgacctgggcggggcggccacg
gaggtgtcccagaccggcggcttcaccaccccgccgtacgcgtacacggcggaaccggcg
tcctccgtcgtggcgagcgtcaccgcccaggcgggcgcgggcaagctctga
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