KEGG   Streptomyces violaceusniger: Strvi_9337
Entry
Strvi_9337        CDS       T01602                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
svl  Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:svl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:svl02048]
    Strvi_9337
Enzymes [BR:svl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Strvi_9337
Prokaryotic defense system [BR:svl02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Strvi_9337
SSDB
Motif
Pfam: Cas3_HD Cas3_C DEAD Helicase_C AAA_19
Other DBs
NCBI-ProteinID: AEM88605
UniProt: G2PH31
LinkDB
Position
pSTRVI01:complement(114016..116787)
AA seq 923 aa
MWGKEKGLLRPYPLICHLLDTAAIAGRLWDVMLGARSHGLIAERLGLGEDASRRWVCCWA
GLHDLGKITPPFQSMSAGRYAVLAADEAYASAPGAEGERGLRHERATHWALTVLFAEWGY
PHGPVSQSVAHQVAQLLGGHHGVFGCALEASKLRSPEVWEPGLGGPGWVGQRAVHAGVVR
VLTGAGGVPSGRLSGEAAVVVSGVVVVADWLASQESVIAERLPADGWVGDGRELAAHWRE
AVEAAEWVVAGAGLGSAVFPVRSFAGQFPFSANALQESVERGLPGLVGERGSGLVLVTAP
TGDGKTEAALHAASVLGRVSGAGGVFVALPTMATADAMVSRVEGFARVNVGGDRALVLLH
SMAWLSRWGGSDQDDRGRVVADGVTALEAGEWLRGGRRGLLAPLGVGTVDQVLTGVLPVR
FNVLRLLGLANKVLVVDEAHAYGPWMHMLLVRLLEWLGALSAPVVLLSATLSGRVASSLV
EAYRRGCGFREPAVVEPCYPGWLFVDAASGGVSRPRAVGSDRPRTLRVVVEPVAWDVREP
AGVPAAGSRRAALVEYLTPVVEQGGCVLVCCTTVDEAQRTFRFLRSVFPELAGEEGGLRL
LHARFPAWRREEITGECERAFGKPGAEGVARPVCSVLVATQVVEQSLDLDFDLVVSDLAP
LAQLLQRAGRCLRHERGGRPGWVGSDPWLVVLDPLGEEGVEPPRSWGEVYDVSLLVRTRR
LLVERAGKGIAVPGDVQQVVDEVYAEDFGERLDQAAAEELRLRDARRVAGEAAETQLAKL
TAIPSPYASSLRDLSLLSGAEGLVDEALVTTRLGADSERAVCVYEHAGGALTLDPEGRRE
LPGVDGRRLFRGQVAEVMRHTVPLPGRWLAGRDERHAALVAWSDRPVLASLVVLRFRLGA
DERWSCSVGDRSLLLDDLGVSER
NT seq 2772 nt   +upstreamnt  +downstreamnt
ttgtgggggaaggaaaaggggctgctgaggccctatccgttgatctgtcatctgttggat
acggcggccatcgcgggtcggctgtgggacgtgatgctgggggcccgctcgcatgggctg
atcgctgagcggctggggctgggtgaggatgcgtcgcggcggtgggtgtgttgttgggcg
gggttgcatgatctggggaagatcactccgccgtttcagagcatgtcggccggcaggtac
gccgtcctcgccgcagacgaggcgtatgcatcggcgccgggcgcggagggggagcggggc
ctgcggcatgagcgggcgacgcactgggctctgacggtcctgttcgcggagtggggctat
ccgcacggcccggtgtcacagtccgtggctcatcaggtggcgcagctgctcggtgggcat
cacggggtattcgggtgtgcattggaggcgtcgaagctgcgttcgcctgaggtgtgggag
ccggggttgggcgggcctggctgggtggggcagcgggctgttcatgctggtgtggtgcgc
gttttgacgggggcgggtggggtgccgtcgggtcggttgtcgggtgaggcggcggtggtg
gtgtcgggtgtggtggtggtcgcggattggctggccagtcaggagtcggtgatcgcggag
cggttgccggcggatggctgggtgggggacgggagggagttggcggcgcactggcgggag
gcggtggaggcggctgagtgggtggtggcgggggccgggctggggtcggcggttttcccg
gtccggtcgttcgcggggcagtttccgttttcggcgaatgcgttgcaggagagtgtggag
cggggtttgccggggttggtgggggagcggggttcggggttggtgctggtgacggcgccg
acgggggatgggaagacggaggcggcgttgcatgcggcgtcggtgttggggcgggtgtcg
ggggcggggggtgtgtttgtggcgttgccgacgatggcgacggcggatgcgatggtgtcg
cgggtggaggggtttgcccgggtgaatgtgggtggggatcgggcgttggtgttgttgcac
agcatggcgtggctgagccgttggggtgggtctgatcaggatgatcgtgggcgggtggtg
gctgatggggtgacggcgctggaggcgggggagtggttgcggggtgggcggcgtgggttg
ttggcgccgttgggggtggggacggtggatcaggtgctgacgggtgtgttgccggtgcgg
ttcaacgtgctgcggttgctggggttggcgaacaaggtgctggtggtggatgaggcgcat
gcgtatgggccgtggatgcatatgttgctggtgcggttgctggagtggttgggggcgttg
agtgcgccggtggtgctgttgtcggcgacgttgtcggggcgggtggcgtcgtcgctggtg
gaggcgtatcggcggggctgtgggtttcgggagccggccgtggtggagccgtgttatccg
gggtggctgtttgtcgatgcggcgtctggtggtgtctcgcggccgcgggcggtgggcagt
gaccggccgcggacgttgcgggtggtggtcgagccggtggcgtgggatgtgcgtgagccg
gccggcgttccggcggcggggtcgcgtcgggcggccctggtggagtatctgacgccggtg
gtggagcagggcggctgcgtgctggtgtgctgcaccactgtggacgaggcgcagcgtacg
ttccgttttctgcggtcggtgtttcctgagctggcgggggaggagggtgggctgcggttg
ttgcatgcgcggtttccggcgtggcggcgtgaggagatcacgggggagtgcgagagggcg
ttcggtaagccgggggccgagggtgtggcgcggccggtgtgttcggttttggtggcgacg
caggtggtggagcagtcgctggatttggatttcgatctggtggtgagtgacctggctccg
ttggcgcagttgttgcagcgggctggtcggtgtctgcggcatgagcgtgggggccggccg
gggtgggtggggtctgatccgtggttggtggtgctggatccgttgggggaggagggggtg
gagccgccgcggagttggggtgaggtgtatgacgtgtcgctgctggttcgtacgcggcgg
ctgctggtggagcgggcggggaaggggatcgcggtccctggtgatgtgcagcaggtcgtg
gacgaggtctacgcggaggatttcggtgagcggctggaccaggcggccgcggaggagctg
cggctccgggatgcccggcgggttgcgggcgaggcggcggagacgcagttggcgaagctg
acggccatcccgtcgccgtatgcctcgtcgctgcgggacttgtcgctgctcagcggtgcg
gaggggctggtggatgaggcgttggtgacgacgcggctgggtgcggattccgagcgtgcg
gtgtgcgtgtacgagcatgcgggcggggcgttgacgctggatccggaggggcggcgggag
ttgccgggagtggatgggcggcggttgttccgggggcaggtggctgaggtgatgcggcat
acggtgccgctgcccgggcggtggctggcggggcgggatgagcggcatgccgcgttggtg
gcgtggtcggatcggccggtgctggcgtcgttggtggtactgcggttccgcctcggggct
gacgagaggtggtcgtgttcggtcggggatcggtcattgctgctcgatgatctcggtgtc
agcgagcgatag

DBGET integrated database retrieval system