Shewanella vesiculosa: KDH10_000140
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Entry
KDH10_000140 CDS
T08322
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00900
Terpenoid backbone biosynthesis
svm01100
Metabolic pathways
svm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
KDH10_000140 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
svm01006
]
KDH10_000140 (ispA)
Enzymes [BR:
svm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
KDH10_000140 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
KDH10_000140 (ispA)
Prenyltransferases [BR:
svm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
KDH10_000140 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UJL42965
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All DBs
Position
complement(167414..168295)
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AA seq
293 aa
AA seq
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MLAEAITTYQKRVNVTLNEHLTLLDDAAPDLKAAMLHGALLGGKRIRPFLVYSVGDMLGV
NINALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQPTVHVAFNEATAILAGDALQTLA
FEIITAPSNDLHPKQQIAMVRALAKASGYQGMCGGQAIDLSATDHSINIERLTQLHNKKT
GALITCAVELALIAADIPDEHYQLMMKYAHTLGLAFQVQDDILDITASTEELGKPQGSDQ
QSNKSTFPKLLGLDGAKACAEQLIQDALSALTKLPYNSQLIADFAHYIIERRL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgttagctgaagcgataacaacataccaaaagcgcgttaatgttactcttaacgagcat
ttaactttgcttgatgatgccgccccagatttaaaagcagccatgctgcatggggcatta
ttaggcggtaaacgcattagaccatttttggtctatagtgtcggtgatatgctgggtgtc
aatatcaatgcgctggataaagctgccgcagccattgaatgtattcatgcatattcttta
atacatgatgacttaccggctatggacaacgacgcacttcgtcgtggtcaacccacggta
catgttgcctttaatgaagccactgcaattcttgctggagacgcacttcaaacattagcg
tttgaaattatcaccgctcctagcaatgacttacacccaaagcagcaaatcgccatggtg
agagcacttgccaaagcctctgggtaccagggcatgtgtggtggacaagcaattgatctt
agtgctaccgatcacagtatcaatatagaaagattaacccaattacataataaaaaaacc
ggtgcgttgattacttgtgccgtagagctcgcgttgattgctgcagatatacccgatgag
cactatcaactcatgatgaaatacgctcacacgcttggattagcttttcaagttcaggat
gatattttagatatcaccgcaagcactgaagagctaggaaaaccccaaggcagcgatcag
caatcgaataaaagcacttttccgaaactacttggtctcgatggtgccaaagcctgtgca
gaacaactaatacaagatgcactatcagcgctgactaaattaccatacaatagccagtta
attgcagacttcgcccactacattattgagcgaagattataa
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