Shewanella vesiculosa: KDH10_003049
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Entry
KDH10_003049 CDS
T08322
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
svm
Shewanella vesiculosa
Pathway
svm03030
DNA replication
svm03430
Mismatch repair
svm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDH10_003049 (dnaN)
03430 Mismatch repair
KDH10_003049 (dnaN)
03440 Homologous recombination
KDH10_003049 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svm03032
]
KDH10_003049 (dnaN)
03400 DNA repair and recombination proteins [BR:
svm03400
]
KDH10_003049 (dnaN)
Enzymes [BR:
svm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDH10_003049 (dnaN)
DNA replication proteins [BR:
svm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDH10_003049 (dnaN)
DNA repair and recombination proteins [BR:
svm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDH10_003049 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
PglD_N
Motif
Other DBs
NCBI-ProteinID:
UJL41969
LinkDB
All DBs
Position
complement(3531260..3532360)
Genome browser
AA seq
366 aa
AA seq
DB search
MKFSIDRDALLKPLQLVCGAVERRHNLPILANLLVEVSESSLKLTGTDLEVELVGQAAIH
GDIDVGRTTVPAKKLLDIVKSLPEQSELKVEQQDNKWLLRSGRSRFSLATLPAEDYPNVE
AFQADIEFSLKQGVLKSIIDSTQFSMANQDVRYYLNGLLFETEGNVLRAIATDGHRLALS
HRTLEVTLPEKQVIVPRKGVVEMARLLDSDDQDITIAIGDNAIRAVTSSAVFTSKLVDGR
FPDYRRVLPKGGNKVVIASRNQLKQALTRASILSNEKFRGVRIQLESGLLKITANNPEQE
EAEEIIDVEYDSDNLEIGFNVSYLLDVLNNLASDEVRITLIDGNSSALIENHKEEDSMYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcaattgatagggacgccctattaaagccgttgcagctagtgtgcggcgcg
gtagaacgcagacacaatttacctattttagccaacttattagttgaagttagtgagtct
tcacttaagctaacgggcactgatttagaagttgagttagtgggccaagcggctattcat
ggtgatattgatgtcggtcgtacgaccgttcctgccaaaaaactgctggatattgttaag
tcattgccagagcaaagtgaattaaaagtcgaacagcaagataataaatggttattgcga
tcaggccgtagccgtttttccttagcaacattacctgccgaagattaccccaacgttgaa
gcattccaagcggatattgaatttagcttaaagcaaggtgtgttgaagtcgataattgac
tctactcagttttcaatggctaaccaagatgtgcgttattatctcaatggattgttattt
gaaaccgaaggtaatgtattacgtgctatcgctacagatggacaccgtttagcattaagc
catcgcacccttgaggtgacattacctgaaaagcaagtcattgtaccgcgcaaaggtgtg
gttgaaatggcgcgcttactcgacagtgacgatcaggacatcaccattgctattggtgat
aatgctattcgagcggttaccagttctgctgtgtttaccagtaaacttgttgatggacgt
ttccctgattaccgccgagtgttacctaagggtggcaacaaagtggtcattgccagtcgt
aatcaattaaagcaagcgttaacccgtgcttctattctgtcgaatgaaaaattccgtggt
gtacgtattcagcttgaatctggtttattaaaaattaccgctaataatcctgagcaagaa
gaagctgaagagatcattgatgttgaatatgactctgacaatctagaaattggttttaac
gttagttatctacttgatgttttaaataacttagccagtgatgaagttcgtattactcta
attgatggcaattcgagtgccttgattgaaaaccacaaagaagaagattctatgtatgtg
gtgatgccaatgcgtctataa
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