Shewanella violacea: SVI_0099
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Entry
SVI_0099 CDS
T01206
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
svo
Shewanella violacea
Pathway
svo00521
Streptomycin biosynthesis
svo00523
Polyketide sugar unit biosynthesis
svo00541
O-Antigen nucleotide sugar biosynthesis
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
svo01250
Biosynthesis of nucleotide sugars
Module
svo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SVI_0099 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SVI_0099 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SVI_0099 (rfbC)
Enzymes [BR:
svo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SVI_0099 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
BAJ00070
UniProt:
D4ZDE8
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All DBs
Position
complement(115208..115753)
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AA seq
181 aa
AA seq
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MNITDTPIADLKLLSPRVHEDERGCFCETFRDSWFRQQIADVTFVQENHSRSIKGCLRGL
HFQSPRSQGKLIRVVVGEIFDVAVDLRKHSPSLGQWFGTYLSAKNRQQMWLPAGFAHGFY
VTSDSAEIIYKCTDYYAPEFEKTLTWDDDTLAIDWPLRGQLPILSSKDKIGLSFDDITQG
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcactgacacgccgatagcagatttaaaactactttctcctcgcgtccatgaa
gacgagcggggctgtttctgcgaaactttccgtgactcctggtttaggcagcagatagcc
gatgtcactttcgtgcaggagaaccatagccgctcgattaaaggctgcttaagaggctta
cattttcaatcaccacgcagccaaggcaagttaatacgtgtggtcgttggtgagatattc
gatgttgcggtcgatctacgcaaacacagtcctagcttaggtcaatggttcggtacatat
ctatcggcaaaaaatcgtcagcagatgtggcttccagcaggctttgcccacggcttttat
gttacttcagattctgcggagataatctacaagtgtaccgattattatgcccctgagttc
gagaaaaccctcacttgggacgatgacactcttgccatagactggccccttcggggacaa
ttacccatattatcaagcaaagataaaatagggctttccttcgatgacataacccagggc
ttgtga
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