Streptomyces vinaceusdrappus: N6Q81_20855
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Entry
N6Q81_20855 CDS
T11167
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
svq Streptomyces vinaceusdrappus
Pathway
svq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N6Q81_20855 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svq03021
]
N6Q81_20855 (rpoB)
03400 DNA repair and recombination proteins [BR:
svq03400
]
N6Q81_20855 (rpoB)
Enzymes [BR:
svq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N6Q81_20855 (rpoB)
Transcription machinery [BR:
svq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N6Q81_20855 (rpoB)
DNA repair and recombination proteins [BR:
svq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N6Q81_20855 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
UXI80291
UniProt:
A0ABY6BXG6
LinkDB
All DBs
Position
4450248..4453733
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNAASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVES
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADEPLDAGVLTTDDIIATIKYLVKLHAGETETVGESGREIVVETDDIDHFG
NRRIRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRINPFGFIETPYRKVVDGQVTDEVDYLTADEEDRFVIAQANATLNDDMRF
AEARVLVRRRGGEVDYVPGDDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSESPLVGTGMEYRSAADAGDVVKAEKAGVVQEVSADYITTTNDDGTYITYRLAK
FARSNQGTSVNQKVIVNEGDRVIEGQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKINPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASQGWDVSGLADEWAQRLQNIGADKVEPRTNVATP
VFDGAREDELAGLLEHTIPNRDGERMVLPSGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaatgcctcgaccgcgaatacgaacaacgctgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaaccttctcgcgctg
caaaccgagagcttcgactggctcctcggcaacgacgcctggaaggctcgcgtcgagtcg
gctctggagtccggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctcgccgatcgaggacttctccgggtcgatgtcgctgacgttccgcgaccaccgcttc
gagccccccaagaacagcatcgacgagtgcaaggaccgcgacttcacgtacgcggcgccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtcgtgtcgcagctcgtccgctcgccgggcgtctacttcgactcctcgatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tccgtgaccgtcctcctcaaggccctcggctggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgtaagctgcgtccgggcgagccccccacgcgtgaggccgca
cagacgctgctggagaacctgtacttcaacccgaagcgctacgacctggccaaggtcggc
cgctacaaggtcaacaagaagctcggcgcggacgagccgctggacgccggcgtgctcacc
accgacgacatcatcgccaccatcaagtacctggtgaagctgcacgccggtgagaccgag
acggtcggcgagtcgggccgggagatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgccgcatccgcaacgtcggcgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgacgacccaggacgtcgaggcgatcacgcct
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaacaacccgctgtcggggctgacgcacaagcgtcgt
ctgaacgccctcggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgcgac
gtccacccgtcgcactacggccgcatgtgcccgatcgagacgcccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacgggcggatcaacccgttcggcttcatcgagacg
ccttaccgcaaggtcgtcgacggccaggtcaccgacgaggtggactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgccacgctcaacgacgacatgcggttc
gccgaggcccgcgtcctggtccgccgccgtggcggcgaggtcgactacgtccccggtgac
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gcggtgccgctcatcaagagcgagtccccgctggtcggcaccggcatggagtaccgctcc
gccgccgacgccggcgacgtggtcaaggccgagaaggcgggtgtggtccaggaggtctcc
gcggactacatcaccaccaccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttcgcccgctccaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggcgac
cgggtcatcgagggccaggtcctcgccgacggtccggccaccgagaacggcgagatggcg
ctcggcaagaacctgctggtcgccttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcgtcgccggcgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
accccggaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtgcgcgac
acctccctgaaggtgccgcacggtgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgcgaagagggcgacgagctgcccccgggcgtgaaccagctggtccgcgtctacgtcgcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccgtcacggcaacaagggcgtc
atctccaagatcaacccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccagggctgggacgtctccggcctcgcggacgagtgggcg
cagcgcctccagaacatcggcgccgacaaggtggagccgcgtaccaacgtggccacgccg
gtcttcgacggtgcgcgcgaggacgagctggccggtctgctggagcacaccatcccgaac
cgcgacggcgagcgcatggtgctcccgtccggcaaggcccggctgttcgacggccgcagc
ggtgagccgttcccggacccgatctcggtcgggtacatgtacatcctcaagctgcaccac
ctggtcgacgacaagctgcacgcccggtcgaccggcccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggcg
ctggaggcttacggcgccgcgtacgccctccaggagctgctgaccatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccctgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctcaacgtg
gaggtgctgtccagcgacggtatgtccatcgagatgcgtgacaccgacgaggacgtcttc
cgcgcagcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
DBGET
integrated database retrieval system
