Setaria viridis (green foxtail): 117837197
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Entry
117837197 CDS
T07951
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117837197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117837197
03012 Translation factors [BR:
svs03012
]
117837197
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117837197
Translation factors [BR:
svs03012
]
Eukaryotic type
Release factors
117837197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
117837197
NCBI-ProteinID:
XP_034572676
LinkDB
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Position
9:complement(7770145..7773437)
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AA seq
437 aa
AA seq
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MSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKNSATGETIIKHLNKEQEADQSHFRD
PSTNAELEVQEKTSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI
RSFDELSDDEGVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggtcaggaaactgacaagaacattgagatttggaagatcaagaagttgatc
aaggcattggaatctgctagaggcaatggtaccagcatgatctctctgattatgcctcca
cgtgatcaaatctcccgtgtgaccaagatgttgggtgatgaatatggtactgcttcaaac
attaagagcagagttaatcggcaatctgttctagcagccatcacctcagcccagcagagg
ctgaagctgtataacaaggttccaccaaatggacttgttctctacactggaacaattgtt
actgaagatggcaaggaaaagaaagttaccattgattttgagcccttcaagcctatcaac
gcatccctgtatctttgtgacaataagttccatactgaagctctgaatgaactcttggaa
tctgatgacaagtttggcttcattgttatggatggtaatggaactcttttcggcacactg
agtggcaacacccgtgaagtgcttcacaaattcactgttgatctgccgaagaagcatgga
agaggaggacaatctgctcttcgttttgctcggcttcgaatggaaaagcgtcacaattat
gtccgaaagacggctgaacttgctacacagtttttcatcaatccagctaccagtcagcct
aatgtcgctggacttatattggctggttctgctgattttaagacagaactgagccaatct
gatatgtttgaccagcgtctccaggccaaaatacttaatgttgttgatgtttcgtatggt
ggtgagaacggttttaaccaagcaattgagttgtcagctgaaattctagcaaatgtgaaa
ttcatacaggagaagaagctgattggaaaatattttgaagaaattagtcaagatacaggg
aagtatgtctttggtgttgatgacacactgaaggctcttgaaatgggtgctgttgagacg
ctcatagtgtgggaaaacctcgatgtcaacagatatgtgcttaagaatagtgcaactgga
gaaactattatcaaacatctgaacaaagagcaagaagctgaccagagccatttccgtgat
ccatctaccaatgcggagttggaggttcaggagaaaacctcacttttggaatggtttgct
aatgagtacaaaaagtttgggtgcacacttgagtttgttaccaacaaatctcaagaggga
tcacagttttgcagaggatttggtggcatcggtggcatgttgcgctatcaactggatatc
cgttcttttgatgagctttctgacgacgaaggggtctatgaagactctgattaa
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