Setaria viridis (green foxtail): 117839549
Help
Entry
117839549 CDS
T07951
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00450
Selenocompound metabolism
svs00970
Aminoacyl-tRNA biosynthesis
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117839549
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117839549
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117839549
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117839549
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
117839549
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117839549
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117839549
Prokaryotic type
Other AARSs
117839549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
117839549
NCBI-ProteinID:
XP_034575804
LinkDB
All DBs
Position
9:complement(21371865..21374330)
Genome browser
AA seq
409 aa
AA seq
DB search
MLCLSPHLHLHLHHRSLAGRPPPMLSRQSPTPLGLELPEAAPLACGWTRSREGRRTSGGG
AAAYREEARRGLPRRGEVPPHTEGRRTGEAPRLQLARPHWTYSRRRLPGHDSHCSGPPVC
WLLLVMFPATLLGTGENWTLLKAISVTEYLTYESGKFSKAKGIGVFGNDAKDTNIPPEVW
RYYLLTNRPEASDTQFTWTDLQAKLNNELVNKLGNFINRVLSFIAKPEGAGYGSIIPPAT
NAKSHPRTQAISETVGKLVDQYIEAMDKVKLKQGLKIAMAICSEGNAYLQESQFWKLYKQ
DPPGCATVMKTSVGLVYLLACLLEPFMPSFSKEVLQQLNLCPEEHLSFCDEKGDRDKAKR
PWDLIPSGHRIGKPAPLFKGLDDNTVKGFKEKFAGSQTERRLRAEVAAQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcctctcgccgcacctccacctccatctccaccaccgctccctcgccggacgg
ccgccgcccatgctctcgcgccagtcaccgacaccgctagggctggagctgcccgaggcc
gcaccgctagcctgtggctggacgcggtccagagagggccgccgcacgtcggggggaggc
gccgccgcataccgagaggaggcgcgtcgcgggctgccacgtcgcggggaggtgccgccg
cacaccgagggaaggcggacaggggaggcgccgcggctgcagcttgcccgaccacactgg
acctactcccgccgccgcttgcccggccacgactcgcactgctccggcccgccagtctgc
tggttgctgctggtcatgttccccgccacgctacttggaactggcgaaaattggacttta
ctgaaggcaattagtgtgactgaatatctgacctacgaatctggaaagttttccaaagct
aagggcattggagtctttggcaatgatgcaaaagacacaaacattcctcctgaagtttgg
cgatattacttgcttaccaaccgtcctgaggcatcagatacacaattcacttggacagat
ttgcaagccaagctcaacaacgagttggtaaacaagttgggcaacttcattaatcgagtg
ctaagcttcattgcaaaaccagagggagctggatatggctccatcatacctcctgcaaca
aatgcaaagtcacatccacggacacaggcaatttcagaaacagttggcaaattggttgac
cagtatatagaagcaatggacaaggtcaaactaaaacaaggactgaagattgcaatggcc
atttgcagtgagggaaatgcatacctgcaagagagtcagttttggaagctttacaaacaa
gatccacctggttgcgcaactgtgatgaagacttccgttggccttgtgtacctcctggcc
tgtttgctggaacctttcatgccgtccttctcaaaagaggtcctccaacagctcaatcta
tgtccagaagagcatctgtcattttgtgatgaaaaaggagatagagacaaagcaaaaagg
ccatgggatctcataccatcaggccacaggatagggaaacctgcacctttattcaaagga
ttggatgacaacacagtgaagggcttcaaggaaaaatttgcaggcagtcaaactgaaaga
agattgagggctgaagttgctgcacaatag
DBGET
integrated database retrieval system