Setaria viridis (green foxtail): 117839557 Help Entry 117839557         CDS       T07951                                  Name (RefSeq) RNA helicase aquarius   KO K12874   intron-binding protein aquarius Organism svs  Setaria viridis (green foxtail) Pathway svs03040   Spliceosome Brite KEGG Orthology (KO) [BR:svs00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     117839557  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:svs03041]     117839557 Spliceosome [BR:svs03041]  Complex B   Other components    Prp19-related factors     117839557  Complex C     117839557 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Aquarius_N_1st Aquarius_N_2nd AAA_11 AAA_12 Aquarius_N_3rd AAA_19 AAA_30 AAA_22 ResIII UvrD_C_2 UvrD-helicase SLFN-g3_helicase AAA AAA_16 Motif Other DBs NCBI-GeneID:  117839557 NCBI-ProteinID:  XP_034575809 LinkDB All DBs Position 9:complement(42432600..42442444) Genome browser AA seq 1568 aa AA seqDB search MPKVFGTGVFEFRHPRAAEYPLPADAAPATTAAPDKVPASTGGASITLLDIQRDRLTRVA VEHWGAAAAAGAFDADLVREIYATELRVEGRGRKTVPLHRVMILEVSQYLENYLWPHFDP ANASFEHVMSIILMVNEKFRENVAAWTCFHDRKDAFKGFLWRVLKLKEEERALNMAEKTN YLLFMINAFQSLEDELVRETILQLVSLKLWNTLSFGRLQMELCLNPELIKKWTKIKRREA KEAKKADQPTNPSETLENKFLRNLIEEFLEILDSKVILSSQDGGEESVLNEPLGGQVDDS CVLYCERFMEFLIDMLSQLPTRRFLRPLVADVAVVAKCHLSALYTHEKGRLFAQLVDLLQ FYEGFEINDHSGTQLGDDDILQAHYSRFQAFQLLAFKQVAKLRDFSLSSIGSLHKRADLT KKLLVLSDVELQDLVCNKLKLISEKDPCSGRRDFLIEVLVAFFEKRQSQKDAVNALPLYP NEQIMWDESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEA VPHLHAHINNEGETAFRGWSRMAVPIKEFKIKEVKQPNIGEVKPSAVTADVTFSISSYRH QIKSEWDALKEHDVLFLLSIRPSFEPLSPEEAAKSTVPERLGLQYVRGCEVIEIRDEEGT LMNDFTGKIKREEWKPPKGEMRTVRIALDTAQYHIDVTETAEKGAENVYGTFNILMRRKP KENNFKAILESIRDLMNETCVVPEWLHNIFLGYGNPSAAQWINMPDLLEVIDFKDTFLDA NHVQQSFPDYQVTFINSDGTENLHPSPPFKIRLSKKLRESSHALPGNVNSSLSVKNNDNM ADGESQKEKLIVETYIPADPGPYPQDKPKQNSVRFTPTQIGAIISGVQPGLTMVVGPPGT GKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELA TDLDFSRQGRVNAMLVRRLELLGEVSKLARSLRLPEDVGYTCETAAYFWLLHVYARWEQF LAACAQNQDNPTFVKDRFPFSEFFSDTPQPIFTGESFEKDMHAAKGCFKHLSTIFQELEE CRAFELLKSTVERANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKFDNLLMEESAQILEI ETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPY IELNAQGRARPSIAKLYNWRYRELGDLPYVREQAIFHKANAGFSFEYQLVDVPDYKGKGE SAPSPWFYQNEGEAEYIVNIYIYMRLIGYPANKISILTTYNGQKLLIRDVINKRCKPWNI EPPNKVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLIVAMSRARLGLYVFCRRSLFE QCYELQPTFQLLLQRPDKLALNLEECTPFTERPLGETGNIHYVTGIEDIEHLVKFRLEHL SQMQYMQYYAPPANELPPAAPENIADVVPPENGSVLNQPKEHMAVEENGGASDTTVSNKM EEDAVEAKDGTMQEGNKMSEGNGDGDVAAKDKGEEHDDANDKMEEGDASLKDKIEEENSE PKDKMDEE NT seq 4707 nt NT seq  +upstreamnt  +downstreamnt atgccgaaggtctttggcaccggcgtcttcgagttccggcacccccgcgcggcggagtac cctctccccgcggacgccgcccccgctacgaccgcggcgcccgacaaggtccccgcgtcc accggcggcgcctccatcacgctcctcgacatccagcgggaccgcctcacccgcgtcgct gtcgagcactggggcgcggccgccgccgcgggggccttcgatgcggacctcgtcagggag atctacgccaccgagctccgcgtcgagggtcgcggccggaagaccgtgccgctgcaccgc gtcatgatcctcgaggtcagccagtacctcgagaactacctgtggccgcacttcgacccg gcgaacgcctccttcgagcatgtcatgtccatcatcctcatggttaacgagaagtttcgg gagaatgtggcagcgtggacgtgtttccatgaccgtaaggatgctttcaaggggttcctg tggcgggttctcaagctcaaggaagaggaaagggcccttaatatggcagagaaaacaaat tacctcctgttcatgataaatgcatttcagagtttggaggatgagcttgtccgggaaact atacttcagttagttagcctaaagctgtggaatactctttcttttggacgacttcagatg gaactctgccttaaccctgaattgattaagaagtggaccaaaatcaaaagaagggaagca aaggaagcaaaaaaggctgaccaacctaccaatccttctgaaacgctcgagaataaattc cttaggaatctaattgaagaattcttggagattctcgattcaaaggtcatattatccagc caagatggtggtgaagaatctgtattgaatgagccactcggtgggcaggtcgatgattct tgcgtcctatattgtgagagatttatggaatttctgattgacatgttgagccagcttcct actagaaggtttttgaggcccctagttgctgatgttgctgtcgttgctaagtgccactta agtgcactctatactcatgaaaagggacgcctttttgcacagttggttgacttgctgcag ttttatgaaggctttgagattaatgatcattctggaacacagcttggtgatgatgatatc ctgcaagctcattattctcgtttccaagctttccagctgctagcatttaagcaagtggct aagttgcgagatttttccttgtctagtattggttcactgcataagcgagctgacttaaca aaaaagctgcttgtcttgtcggatgtggaactgcaagatctggtttgtaacaagctcaag ttaatctcagagaaagatccatgcagtggaaggcgtgattttcttatagaagtcctagtt gctttttttgagaagcggcaatcccaaaaagatgcagtaaatgcacttcctctttatcca aatgagcagatcatgtgggacgaaagccttgttcctagtattaattactctggagaaggc tgtcttgctctcccaaaactcaatctccaattcctgacgcttcatgattatttgttaaga aatttcaatctgtttcgtcttgaatcaacctatgaaattcgtgaagatattcaggaagct gttcctcatctacatgctcatatcaacaatgagggagagactgccttccgtggatggtcc agaatggctgttccaatcaaggaatttaagattaaagaagtgaagcagccaaacattggt gaagttaaaccttctgctgtaactgctgatgttactttcagcatatcgagctacaggcat cagataaaatctgaatgggatgctctgaaggagcatgatgttctatttttgctgtcaatc cgcccttcttttgagcctcttagccctgaagaggctgcgaaatcaactgtaccagaaagg ctaggattgcaatatgtacgtgggtgtgaggtcattgaaattcgtgatgaggaaggaaca ctcatgaatgacttcacaggaaagataaagcgagaagaatggaaaccacccaagggtgag atgcgtactgtccgaattgcactagatactgcacagtaccacatcgatgtaactgaaaca gcagagaagggtgcagaaaatgtctatggaacatttaatattctaatgagaaggaagccc aaggaaaataatttcaaagcaatcttggaatctatacgtgatctaatgaatgaaacatgt gtggttccagaatggttgcataacatattcttgggttatggaaatccttctgctgcgcag tggataaatatgcctgatcttctggaagttatagatttcaaggacacttttcttgatgct aaccatgtacagcagagttttccagattatcaggttacatttatcaattctgatggtaca gaaaacctgcatccaagccctccttttaagattaggctgtccaagaaattgagggaaagc agtcatgccctacccggcaatgtgaactccagtttatctgttaagaacaacgataatatg gctgatggtgagtctcagaaagagaaactaattgttgagacttacattccagctgatcct gggccatatcctcaagataaacctaagcagaactcagtgaggttcacacccacccagatt ggtgctataatatccggtgttcaacctgggttgacaatggttgttggtcctcctggtacg gggaaaacagatacagctgtgcagatattaaatgttctatatcataactgtccttcgcaa aggacactgattataacccattcgaatcaggctttgaatgacttgtttgagaagataatg cagagggatgtgcctgctaggtaccttctccgccttggtcagggcgagcaagagcttgcc actgatcttgattttagccgtcaaggtcgtgttaatgctatgcttgtccgacggctagag ctgctaggtgaagtttctaaattggcgagatctcttcgccttccagaagatgtgggttac acatgtgaaactgctgcatatttttggttattacatgtttatgctcgttgggaacaattc ttagctgcctgtgcgcaaaatcaagataatcccacttttgtcaaagaccggttcccattt tcggagtttttttcagatactccacagcctatttttaccggtgagtcttttgagaaagat atgcatgcagccaagggttgtttcaaacatctttcaacaatattccaagagctggaagag tgtcgggctttcgaactacttaagtcaacggtggagagagcaaattatctaatgacgaaa caggcgaagattgtcgccatgacttgtactcatgcagcattaaagaggcgagactttctt caattaggtttcaaatttgacaatttgctgatggaagaaagtgcacagatattggagata gaaacttttatccctatgctgctgcaacgacaggaagatggccatgctcgtcttaaacgt tgcattttaattggcgatcaccatcagttaccccctgtggtgaagaacatggcttttcag aagtacagtcacatggaccagagtctgtttactaggtttgttcgtcttggtatcccttat attgagctcaatgctcagggtcgtgcaagacctagtatcgctaaactctataactggaga tacagagagctgggagatctgccttatgtgcgtgagcaagcgatcttccataaagctaat gctgggttctcttttgagtatcagttggttgatgttcctgattataagggcaaaggcgag tctgccccctctccttggttctaccagaatgaaggggaggctgagtatattgtcaatata tatatctacatgcgcctgattggctaccctgccaataagatttcaatattaaccacctac aatggccagaagcttcttattcgtgatgtcataaacaaaagatgcaagccatggaatatt gagccacctaacaaggtcaccactgtggacaagttccagggtcagcaaaatgatttcatt ttactctctcttgtccggacccgttttgtgggccatctccgtgatgttaggagacttatt gtggctatgtcccgtgctcgtctgggcttgtatgtgttctgccggcgttcactgtttgaa cagtgttacgaattgcagccaacattccagcttctcctccaaagacccgataaacttgcc ttgaatcttgaggagtgcactccatttacagagcgacctttgggggaaactggaaatatc cattatgttactggtattgaagacattgaacatctggttaagttcagactggaacatctt agtcagatgcaatatatgcagtattatgctcctccagcaaatgagctacctccagcagcg ccagaaaatattgctgatgtagtacctccagaaaacggcagtgttctgaatcagccaaag gagcacatggcagtggaagaaaatggtggtgcaagtgacaccacggtcagtaacaagatg gaggaagatgcggttgaagcaaaggatggaacgatgcaggaaggaaacaagatgagtgaa gggaatggtgacggtgacgtggctgcaaaggataagggcgaagaacatgatgatgcaaat gacaagatggaggaaggagatgcctcgttgaaggacaagattgaggaagaaaattcagag ccgaaggacaagatggatgaagagtga

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