Setaria viridis (green foxtail): 117839571
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Entry
117839571 CDS
T07951
Name
(RefSeq) ATP-dependent DNA helicase DDM1 isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117839571
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117839571
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
117839571
NCBI-ProteinID:
XP_034575826
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Position
9:complement(6842097..6848289)
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AA seq
839 aa
AA seq
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MVEEMVVAVPNGVKAEAAAAAAATADSPKSVLEDEKISEPKKGDDSLATEPTKQEEESTD
DFVDASLSLPADLEIDSDSAPVAKAVKEEEQLQEPVKEEEVDDFVDESLSVPIDLEAKNG
DASLITEAMKKEEEQLEGARVKSEEEEEARKREEAAKQAFDPEARYSKLDELLTKTQLFS
EFLLEKMDQIADQEVVEPQAEEPPAEEKKKGRGRKRKANAAPQYNDKKAKTAVAAMLTRS
REERLADDCNLSEEERWKKEQANLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGILADQM
GLGKTIQTIGFLAHLKGKGMHGPYMIIAPLSTLSNWVNEISRFVPSVTSIIYHGDKAARA
EIRRKFMPKIKTAVSPDFPIVVTSYEMAMSDAKFLAHYKWKYVVVDEGHRLKNSKCKLLR
EIKRIPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFASHQEFESWFDFSAKGSEEKEET
EEKRRVHVVSKLHAILRPFLLRRMKEDVEQMLPRKKEIIIYANMTELQKRIQDHLVEKTF
DVYLNEESDIVLRRPGIKAKLNSLFIQLRKNCSHPDLLEAAFGTTSLYPPVDKLLEQCGK
FQLLDRLLTSLLARKHKVLIFSQWTKVLDIMEYYLDSKGLEVCRIDGGVKLEERRRQIAE
FNDVNSNLNVFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHV
YRLATSNSVEGRIIKKAFGKLKLEHVVIGKGQFEQERAKPNVLEEGELLALLRDEQAEED
RMIQTDISDEDLLKLMDRSDLSGPPGAADATPLIPLKGPGWEVVVPTKSGGGMLSSLTS
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagagatggtagtcgccgtgccgaacggggtgaaggcggaagccgccgccgcc
gccgccgccactgcagattctcctaaatccgttttggaggacgagaaaatttctgaaccc
aagaagggggacgactcccttgccactgagccaactaagcaagaggaggagagcactgat
gattttgtggatgcaagcttgtccctgcctgctgaccttgaaatcgacagtgatagtgct
cctgttgctaaggcggtcaaggaggaagagcagcttcaggagcctgtgaaggaggaggaa
gttgatgatttcgtggacgaaagtttatctgtacctattgacctcgaggccaagaatggt
gatgcatccctaatcacagaagcaatgaaaaaggaagaagagcagcttgagggggcacgg
gttaagtcagaggaagaagaggaagccaggaagagggaagaagctgcgaaacaggctttt
gatcctgaggcacggtatagcaagttagatgagttgctgacgaagacgcaactcttttca
gagtttttacttgagaaaatggaccaaattgctgatcaggaagttgttgaacctcaagct
gaagagccaccggcagaagaaaagaagaaaggacgtggccgaaagcggaaagctaatgct
gcgccacaatacaatgataaaaaagctaagacggcagtggcagccatgcttacaagatct
cgtgaagaacgccttgcggatgattgtaatctctcagaagaagaaaggtggaaaaaagag
caagccaatcttgtgcctttaatgactggtgggaagttgaagtcataccagataaagggt
gtgaagtggctaatttcattgtggcagaatgggctcaacgggatactggctgaccaaatg
ggccttgggaaaacaatccagacgattggatttcttgctcatctgaaagggaaaggaatg
catggtccgtacatgataatcgctcctttgtccactctctcgaactgggtgaatgagatc
tcgaggtttgttccatccgttactagtatcatttatcatggagataaagcggcccgggct
gagataagaaggaaattcatgcctaaaattaaaactgctgttagccctgattttcctata
gtagtgacttcatatgagatggccatgtcagatgcaaaatttcttgctcactataagtgg
aagtatgttgttgtggatgaggggcatcggttgaaaaattcgaagtgtaaattgctaagg
gagataaagcgtataccaatggataataagctccttttgactgggacaccccttcagaac
aatcttgcagagctgtggtcgctattgaacttcattttgcctgatatattcgcatcacac
caggaatttgaatcatggtttgatttttctgcaaaaggaagtgaagaaaaagaagaaact
gaggagaaaagaagggtccatgttgtttcaaaacttcatgccattctgcgtccattcctt
cttaggcggatgaaagaggatgtcgagcagatgcttccacgaaagaaagagataatcatt
tatgctaacatgactgagcttcagaagcgaatccaggatcacttagttgagaaaacattt
gatgtctacttgaatgaagaatcagatattgtgttgcggaggcctggcattaaggcaaag
ctaaatagtctatttattcaactgaggaagaattgcagccatcctgatcttttggaagct
gcatttggaacaacaagcctgtatccacctgttgataagcttctagagcaatgcggcaaa
tttcagcttctggacaggttactaacttccttacttgcacgaaagcacaaggttctaata
ttttcacaatggacaaaagttttggacattatggagtattacttggattcaaaaggtctc
gaggtttgcagaattgatggtggtgtcaagttggaagagaggcggcggcagatagcagaa
ttcaatgacgtgaacagcaatctaaatgtcttcattctgagcacacgtgctggtgggctt
ggtatcaaccttacttctgctgatacatgtattctatatgacagtgactggaatcctcag
atggatctgcaggccatggacagatgccaccggattggtcaaacacgcccggtgcatgta
tataggctggcaacatcaaattctgttgagggacggatcatcaagaaagcttttgggaag
ctgaaactagagcacgttgtgatcgggaagggtcagtttgaacaagagagagcaaagcct
aacgttctagaggaaggggagctgctggcgctgcttagggatgagcaggccgaggaagac
aggatgatccagaccgacatcagcgacgaagatctcttgaagctgatggaccggagtgac
ctgtcaggaccgcctggtgctgctgacgccacgccacttatccctctgaaaggccctggc
tgggaggtcgtggtgcccacgaagagtggcggcggcatgctctcgtcgctcaccagctga
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