Setaria viridis (green foxtail): 117841744
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Entry
117841744 CDS
T07951
Name
(RefSeq) nuclear ribonuclease Z isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117841744
Enzymes [BR:
svs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
117841744
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
117841744
Prokaryotic type
117841744
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
117841744
NCBI-ProteinID:
XP_034578119
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Position
1:complement(3589082..3595563)
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AA seq
304 aa
AA seq
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MAKGSKSAAAADESAVTSTSAPTRPRAMQRVEIEGYSVEGISIAGHETCVMFPSLNLAFD
IGRCPPFAVSQDLLFISHAHMDHIGGLPLYVATRGRRRMRPPTVFVPACLADLVRKLFEV
HRAMDQSDLDHKLVPLEVGEEYELGKDLRVRPFKTYHVVPSQGYVIYRLKHKLKDEYAGL
PGKELGTLRKSGVEITNTVSTPEIAFTGDTMSDFILDPDNADVLKAKILVVESTYIDDSK
SIEDAREKGHTHLSEIASLSDKLENKAILLNHFSNRYTAEDIDVAINRLPPPFRSRVYAL
KEGF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagggcagcaagtcagcggcggccgctgatgagtcagcggtgacctcaacctct
gctcccacacggccgagggcaatgcagcgggttgagatcgagggctactccgtggagggc
atctcgatcgctgggcatgagacatgcgtcatgttcccctccctcaacctcgctttcgac
attggccgctgtccgccgttcgccgtctcgcaggacctcctcttcatctcccatgcgcac
atggaccacattgggggcctccccctgtacgtcgccacgcggggtcgcaggaggatgcgc
ccgcccaccgtcttcgtccccgcatgccttgcggacctcgtgcggaagctctttgaggtc
caccgagccatggaccagtctgacctcgaccacaagctcgtgccgctcgaggtaggggag
gagtacgagctcggcaaggacctcagggtcaggccgttcaagacctaccatgtcgtgccc
agccaggggtatgtgatatacaggctgaagcacaagcttaaggacgagtatgctggcctt
ccagggaaagaactcggtactctcagaaagtcaggagttgagattacgaatacagtgtcg
acacctgagattgctttcacgggagatacaatgtcggatttcatccttgatcctgataat
gcagatgtgttgaaggcgaaaattctagtggttgagagtacttatattgatgactccaaa
tcaattgaggatgcaagagaaaaggggcacactcacttgtctgagatagcgagtctgtct
gacaagcttgaaaacaaagctattttactaaatcacttttcaaatcggtatactgcagag
gacattgatgtagcaatcaacagattgccaccacctttccgaagcagagtttatgcattg
aaggaaggcttctag
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