Setaria viridis (green foxtail): 117849355
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Entry
117849355 CDS
T07951
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117849355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117849355
Ubiquitin system [BR:
svs04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117849355
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
117849355
NCBI-ProteinID:
XP_034586793
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Position
1:7076620..7086951
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AA seq
457 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaagaccctcaccggcaagaccatcaccctcgaggtggagtcttct
gacaccattgacaacgtcaaggccaagatccaggacaaggaaggcattcccccggaccag
cagcggctcatctttgccggcaagcagcttgaggatgggcgcaccctggctgactacaac
atccagaaggagagcaccctccacctggtgctccgtctcaggggaggcatgcagatcttt
gtgaagaccttgactggcaagaccatcacccttgaggtggagtcttctgacaccatcgac
aacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagaggctcatc
tttgcgggcaagcagcttgaggatggacgcaccctggctgactataacatccagaaggag
agcaccctccatctggtgctccgcctcaggggaggcatgcagatcttcgtgaagaccctc
actggcaagaccatcaccctcgaggtggagtcttccgacaccatcgacaacgtcaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctcatctttgctggcaag
cagcttgaggacggacgcaccctggctgactataacatccagaaggagagcaccctccac
ctggtgctccgcctgaggggtgggatgcagatctttgtgaagactttgactggcaagacc
attactttggaggttgagagctccgacaccatcgacaacgtgaaggccaagatccaggac
aaggaaggcatccccccggaccagcagaggctcatcttcgccggcaagcagcttgaggac
ggacgcaccctggctgactataacatccagaaggagagcaccctccacctggtgctccgt
ctcaggggaggcatgcagatctttgtgaagaccctcactggcaagaccatcacccttgag
gtggagtcttccgacaccatcgacaacgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagagactcatctttgcaggcaagcagcttgaggacggacgcaccctg
gctgactataacatccagaaggagagcaccctccatctggtgctccgcctcaggggaggc
atgcagatcttcgtgaagaccctcactggcaagaccatcacccttgaggtggagtcttct
gacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccccccggaccag
cagcgtctgatcttcgccggcaagcagctggaggatggccgcaccctggcggactacaat
atccagaaggagtccaccctccacctggtgctccgcctccgtggtggtcagtaa
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