Setaria viridis (green foxtail): 117852296
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Entry
117852296 CDS
T07951
Name
(RefSeq) protein-tyrosine-phosphatase IBR5 isoform X1
KO
K04459
dual specificity MAP kinase phosphatase [EC:
3.1.3.16
3.1.3.48
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117852296
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117852296
Enzymes [BR:
svs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117852296
3.1.3.48 protein-tyrosine-phosphatase
117852296
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
MAPK phosphatases
117852296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSPc
PTP-SAK
Y_phosphatase
Tc-R-P
DUF7803
Init_tRNA_PT
PTPlike_phytase
Y_phosphatase2
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
117852296
NCBI-ProteinID:
XP_034590213
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Position
4:complement(15082557..15086566)
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AA seq
272 aa
AA seq
DB search
MRKRERENPCGICGHYHKYEEGEVCGVCGHRPPVAPAAGARQQDSAFPSEILKEFLFLGS
YDNASRSELLKTIGVSHILNTVPLCQNLYRNSFTYHCLQEDKTLQFDDAIHFLEQCEREK
ARVLVHCMSGKSRSAAFVIAFLMKSRGWRLAQSFQWVKERRPQVQLSDGAQQQLIEYETK
LFGSNVSMPAPSFVPADSFPSLGFGFPKPAGDIQVPTFNQQAPASIFERVSPNNFPTNFT
FGAERAGEVKLPDSNNFGVINSSGGDSMMDST
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcgtgagcgggagaacccgtgcgggatctgtggccactaccacaagtacgag
gagggggaggtgtgcggcgtctgcggccaccgcccgcccgtggcgccggcggcgggggcg
aggcagcaggactcggcgttcccgtccgagatcctcaaggagttcctcttcctcggcagc
tacgacaacgcctcccgctccgagctcctcaagaccattggcgtctcgcacatcctcaat
actgtaccgttatgccaaaacctttaccggaattcattcacttatcactgcctccaagag
gacaaaactctgcagtttgatgatgcaatccactttctagaacaatgtgagagggagaaa
gcacgcgtccttgtgcattgcatgtcagggaaaagtaggtcggccgcatttgtaatagcc
ttcttgatgaaatcaagagggtggagactggcacaatcttttcagtgggtgaaagagcgg
agaccacaagtgcaactgtctgatggggcacagcagcagttgattgagtatgagacgaag
ctttttggttccaatgtcagcatgcctgctccatcttttgttccagcagattctttccct
tctcttggatttggttttcctaaaccagcaggcgacatccaagtgcctacctttaaccag
caggctccagcatccatctttgagcgcgtcagcccaaacaactttcctactaatttcaca
tttggagctgaaagagctggcgaagtgaaacttccagatagcaataatttcggtgtgata
aactcatctggaggcgatagcatgatggacagcacctag
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