Setaria viridis (green foxtail): 117852901
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Entry
117852901 CDS
T07951
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117852901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117852901
Ubiquitin system [BR:
svs04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117852901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
117852901
NCBI-ProteinID:
XP_034591088
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Position
4:complement(37598633..37601367)
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AA seq
457 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcactggcaagaccatcacgcttgaggttgagtcctct
gacacgatcgacaacgtgaaggccaagatccaggacaaggagggcatccccccggaccag
cagcgtctcatctttgccggcaagcagcttgaggatggccggacccttgccgactacaat
atccagaaggagtccacccttcacctggtgctgaggctcaggggtggtatgcagatattt
gtgaagaccctcaccggcaagaccatcactctggaggttgagtcgtctgacaccattgac
aacgtgaaggccaagatccaggacaaggagggcattcctccggaccagcagcgtctcatc
ttcgctggcaagcagcttgaggatggccgtacccttgctgactacaacatacagaaggag
tccactctccaccttgtgctccgcctgcgtggtggtatgcagatctttgtcaagactctt
actggcaagaccatcaccttggaggtggagtcttctgacaccatcgacaacgtgaaggcc
aagatccaggacaaggagggcattcccccggaccagcagcgtctcatcttcgctggcaag
cagcttgaggatggccgtacccttgccgactacaatatccaaaaggagtcgacccttcac
cttgtgctccgcctgcgtggtggtatgcagatctttgtcaagactcttactggcaagacc
atcaccttggaggtggagtcttcagacaccatcgacaacgtgaaggccaagatccaggac
aaggagggcatccccccggaccagcagcgtctcatctttgccggcaagcagcttgaggat
ggccgcaccctggctgactacaacatacagaaggagtccactctccacctggtgctccgc
ctgcgtggtggtatgcagatctttgtcaagacccttactggcaagaccatcaccttggag
gtggagtcttctgacaccatcgacaacgtgaaggccaagatccaggacaaggagggcatt
cccccagaccagcagcgtctcatcttcgctggcaagcagcttgaggatggccgtaccctt
gccgactacaatatccaaaaggagtcgacccttcaccttgtgctccgcctgcgtggtggt
atgcagatctttgtcaagactcttactggcaagaccatcaccttggaggtggagtcttct
gacaccatcgacaacgtgaaggcgaagatccaggataaggagggcatccccccagaccag
cagcgtctcatcttcgccggcaagcagctggaggatggccgcaccttggcggattacaac
atacagaaggagtccaccctccacctggtgctccgtctccgtggtggccagtaa
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