KEGG   Setaria viridis (green foxtail): 117853279
Entry
117853279         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K12869  crooked neck
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117853279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:svs03041]
    117853279
   03036 Chromosome and associated proteins [BR:svs03036]
    117853279
Spliceosome [BR:svs03041]
 Complex B
  Other components
   Prp19-related factors
    117853279
 Complex C
    117853279
Chromosome and associated proteins [BR:svs03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     117853279
SSDB
Motif
Pfam: HAT_PRP39_C HAT_PRP39_N HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N TPR_14 Suf TPR_19 HAT TPR_16 TPR_2 TPR_15 TPR_12 TPR_17 U3_assoc_6 BSD NRDE-2 UTP6_C Wzy_C_2 TPR_EMC2 NifW
Other DBs
NCBI-GeneID: 117853279
NCBI-ProteinID: XP_034591560
LinkDB
Position
4:25710590..25713346
AA seq 698 aa
MALPAASDPGLGSLTSRDTGTRLPRATRVKNKGPAPVQITAEHLLREARELRGSEHPRAP
ARKIADAEELAERRLMERKFFEHSVGRAGASASAWAKYAQWEERQGDLARARSVFERALA
ASASASRDHSLWVKYAELEMRRGCVGDARNVWDRAVALLPRADQVWRKYVHMEETLGEVA
NARQVFDRWMAWWPGATAWCSYARFELRYGEVGRARAVYERFVAEYPRADAFMRYAGFEE
KRGELERARRVFERAADVLADDEEEAGTLLVAFGEFEEEFREVERARAIYQYALDRVPKR
RAEQIYGKLLAWEKQFGDPKGIEDAIVARRRLECQDDVRKNPLNYNSLFELIRLEESVGD
KERIREAYERAVAKVPPAEEKRFWRRYIYIWINYALYEELDAQDAERAREVYRECLNLIP
HKRFTFAKIWLMAAQFEIRQRNLSAARRILGNSIGVAPKPKVFNKYIEMEVSLGNFDRVR
TLYQKFIECYAANSYAWRKYADLEKNLGESDRARAVYELAIAQPTLDNPELIWKEYLEFE
IDGNEFDRARKLYERLLGRTKHLKVWLSYAEFEATAGSCGEDSTNRQMERAQRCRGVFQR
AFDHFRTSSPESKEERAMLLEEWLNREVSFGHLGDVSVVQTKVPTKVKRKRSIPSEDGST
FVCEEFIDYIFPEEITHAPNMKIIEVAYRWKRQKTDDE
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggcgctccccgccgcctccgaccccggcctcgggtccctcaccagccgcgacaccggg
acgaggcttccccgggcgacgcgcgtcaagaacaagggccccgcgccggtacagatcacc
gcggagcacctcctccgggaggcccgggagctgcgggggtcggagcacccgcgcgcgccc
gcgcggaagatcgccgacgcggaggagctcgccgagcgccgcctgatggagcgcaagttc
ttcgagcactccgtcggccgcgccggcgcctccgcctcggcgtgggccaagtacgcgcag
tgggaggagcggcagggagacctcgcccgcgcgcggtccgtcttcgagcgcgcgctcgcc
gcctccgcatccgcctcccgcgaccactcgctctgggtcaagtacgcggagctcgagatg
cggaggggatgcgtcggcgacgcgcgcaacgtctgggaccgcgcggtggcgctgctgccc
cgcgccgaccaggtgtggcgcaagtacgtgcacatggaggagacgctcggcgaggtcgcc
aatgcccgccaggtgttcgaccggtggatggcgtggtggcccggcgccacggcgtggtgc
tcctacgccaggttcgagctccggtacggcgaggtgggccgcgccagggcggtctacgag
cgcttcgtcgccgagtacccgcgcgcggacgcgttcatgcggtacgccggattcgaggag
aagcgcggcgagttggagcgcgcgcggcgggtgttcgagcgcgccgcggacgttctcgcc
gatgatgaggaggaggcggggacgctgctcgtggccttcggcgagttcgaggaggagttc
cgcgaggtggagcgcgcccgtgccatataccagtacgcgctcgacagggtgcccaagcgc
cgtgccgagcagatttacgggaagctgctggcatgggagaagcaattcggggaccccaag
ggaattgaggatgccattgtggccaggaggagattagagtgtcaggatgacgtgaggaag
aatcctctcaactacaattctttgtttgaactcatccggcttgaggaaagtgtcggagac
aaggagaggatcagagaggcatacgaaagggcagttgccaaagtgcctcctgctgaggag
aagcggttctggcgcagatacatatacatctggataaattatgccctgtatgaggagctt
gatgcgcaggatgctgaacgggccagggaggtctacagggaatgcctgaacctaatccct
cacaaaagattcacttttgcaaaaatttggctgatggcagcccagtttgagatcaggcag
aggaatttaagcgcagcaaggcgaatacttggaaattcaattggggttgctccaaagcct
aaggtgtttaataaatacattgagatggaggtatctctgggcaactttgaccgtgtgaga
acactttaccagaaattcatcgagtgttatgcagcaaactcttatgcttggagaaagtac
gctgacctggaaaagaaccttggtgagtctgatcgtgctcgagcagtatatgagcttgca
attgctcagccaacccttgacaatccagagctcatatggaaggagtacttggagtttgaa
attgatggaaatgaatttgatagagcgaggaagctttatgagagattgcttggtagaacg
aagcatttgaaagtatggctcagctatgctgagtttgaagccacagctggctcatgtggt
gaagacagtacaaatcgacagatggagcgggcacaaagatgcagaggtgtttttcagagg
gcgtttgaccacttcaggaccagctcccccgaatcaaaggaggaaagagcaatgctcctt
gaagaatggcttaacagggaggtgagctttggtcaccttggtgatgtgagcgtagtgcag
acaaaggtgccaacaaaagttaaaaggaagcgatcaatcccttcggaggatggctccacc
tttgtatgtgaggagttcatcgattatatattccctgaggaaatcactcatgctccaaac
atgaagatcatcgaagttgcatatagatggaagaggcagaaaactgatgatgagtga

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