KEGG   Setaria viridis (green foxtail): 117859226
Entry
117859226         CDS       T07951                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117859226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:svs03041]
    117859226
Spliceosome [BR:svs03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117859226
 Complex B
    117859226
 Complex C
   U2 SnRNP specific factors
    117859226
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 117859226
NCBI-ProteinID: XP_034598320
LinkDB
Position
5:32729453..32736500
AA seq 503 aa
MASTVLEATRAAHEDLERLERLAVRELQRDPANARDRLFQSHRVRHMLDLVVSTSDKLVE
IYEDNDNARKDEINTHLTAPTQSLLFSKYYERLKEIRDYHRRNPSARFVSTTDDYEELLK
EEPVIEFTGEEAFGRYLDLHELYNEFINSKFGAPMEYSAYVGSFSQMEKISQSHKATRQY
REYLEHILEYLTSFLYRTEPLQDIEKIFAKLESEFEERWANEEVPGWGNKSTEESEIDLD
YYSTVEELVELGPEKLKHALAARGLKSGGTVQQRAERLFLLKHTPLEQLDRKHFAKVPRT
KDVSDASSNGNHFKDDLKKEIALMEVKMRRLCELLDEVFVRTKENAEKKLTLTYEEMEAE
REEEEVQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWG
RRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEARGLWEKIQARQGLNKWRPDLEEE
YEDQEGNIYNKKTYTDLQRQGLI
NT seq 1512 nt   +upstreamnt  +downstreamnt
atggcgtccacggtgctggaggctacgcgggcggcgcacgaagacctggagaggctggag
cggctcgcggtgcgcgagctgcagcgggaccccgccaacgcccgcgaccgcctcttccag
tcgcaccgcgtccgccacatgctcgatctcgtcgtctccacctccgacaagctcgtggaa
atctacgaggacaacgacaatgcaagaaaggatgagatcaacacacatcttactgcaccc
acgcaaagtctactgtttagcaagtactatgaaaggctcaaagagatccgcgactatcat
aggcggaacccttcagcccgcttcgtcagtacaactgatgattacgaagagcttctgaag
gaggaaccagttattgaattcaccggcgaggaagcttttggccgttacctagatttgcat
gagctttataatgagttcataaattccaagttcggagcaccaatggaatactcggcttat
gttggcagtttctcccagatggagaagatctcgcagagtcataaagctacaaggcaatac
agagaatacttggaacacattctggaatatctgacatcatttctttatcgcacagagcca
ttgcaggacattgagaagatttttgcaaagttggaaagtgaatttgaggaacgatgggcc
aacgaagaagtacctggatggggaaataaaagcacggaagagtctgaaatagaccttgat
tattacagcacagttgaagaactcgttgagcttggtccagaaaagttgaaacatgcttta
gccgctcgtggtttgaagagcggcggtactgttcaacagcgtgcagaacgtcttttcttg
ttgaagcatacacctttggagcaactggaccggaagcattttgctaaagttccacgtact
aaagatgtctcagacgcatcttccaatggcaaccatttcaaggatgatttgaagaaggaa
attgcgctgatggaagtaaagatgaggcgcctttgtgagctgctagatgaggtctttgtg
cgaacaaaggaaaatgctgagaagaaactcactttgacatatgaagagatggaagcagaa
cgggaagaggaggaggtacaggctgacactgagagtgatgatgatgaacaacaaatctac
aaccctctcaaattgccgatgggttgggacggcaagcctatcccctattggttatacaag
ctacatggccttgggcaggaatttaagtgtgagatatgtgggaaccacagttattggggg
cgaagggcatatgagcgtcatttcaaggaatggcgtcatcaacatgggatgcgatgcctt
ggtatccctaatactaagaatttcaatgaaatcacatccatcgaggaggcgagaggactc
tgggagaaaatacaagcacgtcaagggctgaacaagtggcggccagacctggaagaagag
tatgaagatcaagaaggcaacatctacaacaagaagacctacactgacctgcagcggcaa
ggcttgatctaa

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